Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0112 |
Symbol | |
ID | 6183106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 103266 |
End bp | 103688 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641670845 |
Product | Phosphoribosyl-AMP cyclohydrolase |
Protein accession | YP_001797045 |
Protein GI | 171462932 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0139] Phosphoribosyl-AMP cyclohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 0.739557 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAC CTCAAAGCAC CCAAAGTACC TTTAGTCCCA TTCAAAACCC ACAAGCCGGA TCATGGCTTG ATGCGGTGAC TTGGAATGAG CAAGGTTTAG TTCCTGTTAT TGCCCAGGAG ATCGGCAGCA AAGATATCTT GATGATGGCA TGGATGAATC GTGATGCTTT GTTGGAAACA TTGCGCCTAG GCGAAGCGGT CTACTGGACT CGTTCCAGAC AAAAGTTGTG GCACAAAGGT GAAGAATCTG GCCATACCCA AAAAGTAAAA GAAATTCACT TGGATTGTGA TGGTGACACA ATTTTGCTTT TGGTTGAGCA AAAAGATGGG ATTGCTTGCC ACACAGGGGA GCATAGCTGC TTTTTTCTGC AATGGGACTC GGCAAAGACC GCATGGGTGG ATGAGTCCAA GAATAAGAAG TAA
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Protein sequence | MSKPQSTQST FSPIQNPQAG SWLDAVTWNE QGLVPVIAQE IGSKDILMMA WMNRDALLET LRLGEAVYWT RSRQKLWHKG EESGHTQKVK EIHLDCDGDT ILLLVEQKDG IACHTGEHSC FFLQWDSAKT AWVDESKNKK
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