Gene Pnec_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0112 
Symbol 
ID6183106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp103266 
End bp103688 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content46% 
IMG OID641670845 
ProductPhosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_001797045 
Protein GI171462932 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.739557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC CTCAAAGCAC CCAAAGTACC TTTAGTCCCA TTCAAAACCC ACAAGCCGGA 
TCATGGCTTG ATGCGGTGAC TTGGAATGAG CAAGGTTTAG TTCCTGTTAT TGCCCAGGAG
ATCGGCAGCA AAGATATCTT GATGATGGCA TGGATGAATC GTGATGCTTT GTTGGAAACA
TTGCGCCTAG GCGAAGCGGT CTACTGGACT CGTTCCAGAC AAAAGTTGTG GCACAAAGGT
GAAGAATCTG GCCATACCCA AAAAGTAAAA GAAATTCACT TGGATTGTGA TGGTGACACA
ATTTTGCTTT TGGTTGAGCA AAAAGATGGG ATTGCTTGCC ACACAGGGGA GCATAGCTGC
TTTTTTCTGC AATGGGACTC GGCAAAGACC GCATGGGTGG ATGAGTCCAA GAATAAGAAG
TAA
 
Protein sequence
MSKPQSTQST FSPIQNPQAG SWLDAVTWNE QGLVPVIAQE IGSKDILMMA WMNRDALLET 
LRLGEAVYWT RSRQKLWHKG EESGHTQKVK EIHLDCDGDT ILLLVEQKDG IACHTGEHSC
FFLQWDSAKT AWVDESKNKK