| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0111 |
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| Symbol | |
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| ID | 6184166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 102468 |
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| End bp | 103226 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641670844 |
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| Product | imidazole glycerol phosphate synthase subunit HisF |
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| Protein accession | YP_001797044 |
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| Protein GI | 171462931 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
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| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.580692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTAACCA AGAGAATTAT CCCTTGCCTC GACGTTACTG CAGGGCGTGT AGTTAAAGGC
GTGAACTTTG TCGGTTTGCG TGATGCAGGT GACCCTGTAG AGATTGCAAA ACGATATGAC
ACGCAAGGTG CAGACGAGCT AACTTTCTTA GACATTACTG CCACATCTGA TGGGCGCGAT
CTCATATTGC ACATCATTGA AGACGTCGCA TCACAAGTGT TTATTCCATT GACTGTTGGT
GGCGGCGTTC GCACAGTTGC AGATGTGCGT CGCCTGCTCA ATGCCGGCGC AGATAAAGTG
AGCATGAATT CTTCCGCAGT AGCCAATCCT GATTTGGTTT CGGATGCCGC TGCATACTAT
GGTTCCCAAT GTATTGTTGT GGCAATTGAT GCCAAGCAAA CAGAAGCAGG CAACTGGGAA
GTATTTACTC ATGGCGGCAG AACAGCTACA GGCATGGATG TAGTTGAATG GGCCAAGGAA
GTTGCCAAGC GTGGTGCTGG TGAAATCTTA TTGACCAGCA TCAACCGCGA CGGCAGTAAA
GATGGTTTTG ATTTAGCGCT TACCGCAGCG GTAAGTGATG CGGTTTCACT CCCTGTCATT
GCTTCCGGTG GGGTGGGTAA TTTGCAGCAT TTAGTCGATG GCATTACTAA AGGCCATGCA
GATGCAGTAT TGGCGGCCAG CATTTGTCAC TATAGTGAGT ACACCGTTGG ACAGGCAAAA
GAATATATGG CCGCCCAAGG AATTCCGGTT CGGATTTAA
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| Protein sequence | MLTKRIIPCL DVTAGRVVKG VNFVGLRDAG DPVEIAKRYD TQGADELTFL DITATSDGRD
LILHIIEDVA SQVFIPLTVG GGVRTVADVR RLLNAGADKV SMNSSAVANP DLVSDAAAYY
GSQCIVVAID AKQTEAGNWE VFTHGGRTAT GMDVVEWAKE VAKRGAGEIL LTSINRDGSK
DGFDLALTAA VSDAVSLPVI ASGGVGNLQH LVDGITKGHA DAVLAASICH YSEYTVGQAK
EYMAAQGIPV RI
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