| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0110 |
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| Symbol | |
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| ID | 6184297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 101707 |
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| End bp | 102468 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641670843 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001797043 |
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| Protein GI | 171462930 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.818955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTGA TTCCCGCAAT TGATCTTAAA GACGGCCACT GCGTTCGACT AGAACAAGGT
GACATGGACA AAGCCACCGT GTTTTCCGAA GACCCGGGAG CGATGGCAGC TCATTGGATT
AGTAAAGGTG CGCGATGTCT ACATTTGGTT GATCTTAATG GCGCATTTGC AGGTAAGTTA
AAAAATGAGT CTGCCATTAA ATCTATTCTC AAAGCGGTGG GCGATGAGAT CCCTGTTCAG
TTAGGCGGTG GTATTCGCGA CCTAGAAACA ATTGAACGCT TATTAGACGA TGGCATCAGC
ACAGTCATTA TTGGAACTGC TGCGGTAAAG AATCCAGGCT TTGTACAAGA TGCCTGCACC
GCATTTCCAG GGCACGTCAT GGTTGGCTTG GATGCACGTG ATGGTAAGGT CGCAACAGAT
GGCTGGAGCA AAATCACGTG TCACAAAGTA ATAGATCTTG CTAAAAAATT TGAAGATTGG
GGTGTAGAGG CGATTATCTA TACCGATATT GGTCGCGATG GCATGCTCAA GGGCGTGAAC
ATTGATGCTA CCGTGAAGTT GGCACAGGCT ATTCGTATTC CAGTGATTGC TAGTGGCGGC
TTATCAAATA ATCAAGATAT TGATGCGCTC TGCAAGGCGG AGGAAGAGGG TGTGATGGGC
GTGATTGCTG GCCGATCTAT TTATGCCAGT GATCTTGATT TAGCTGCCGC TCAAAAATAT
GCCGATGAGT TGACGTTGAA ATATAAAAAG AAAACCAACT AG
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| Protein sequence | MLLIPAIDLK DGHCVRLEQG DMDKATVFSE DPGAMAAHWI SKGARCLHLV DLNGAFAGKL
KNESAIKSIL KAVGDEIPVQ LGGGIRDLET IERLLDDGIS TVIIGTAAVK NPGFVQDACT
AFPGHVMVGL DARDGKVATD GWSKITCHKV IDLAKKFEDW GVEAIIYTDI GRDGMLKGVN
IDATVKLAQA IRIPVIASGG LSNNQDIDAL CKAEEEGVMG VIAGRSIYAS DLDLAAAQKY
ADELTLKYKK KTN
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