Gene Pnec_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0105 
SymbolhisG 
ID6184053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp97615 
End bp98241 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content46% 
IMG OID641670839 
ProductATP phosphoribosyltransferase catalytic subunit 
Protein accessionYP_001797039 
Protein GI171462926 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0040] ATP phosphoribosyltransferase 
TIGRFAM ID[TIGR00070] ATP phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.951142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGA CTTTAGCCCT CTCCAAGGGG CGCATCTTCG AAGAAACCGC AGAGATCTTA 
TCCAAGGTCG GAATTGTGCC GCTGGAAGAT CCTGAGAAGT CGCGCAAACT CATTATTGAA
ACTAGCAATC CAGATGTTCG CTTAATTATT GTCCGCGCAT CCGATGTGCC AACTTACGTG
CAATTTGGTG GCGCTGACTT TGGTGTTGCT GGTTTGGATG CGTTAATGGA AAAAGGCAGC
GATGGTTTAT ATGTGCCTTA TGACCTCAAT ATTGCTAAGT GCCGTATGTC TGTTGCTGTG
CGCGAAGGGT TTGACTACGC TGCTGCAGTC AAACAAGGAT TGCGCATAAA AGTTGCCACG
AAGTATGTCA ATTGCGCACG CGAGCACTTT GCTAATAAAG GTGTGCATAT CGATACGATT
CAACTCTATG GATCTATGGA GTTGGCTCCA CTGGTAGGCT TGGCCGATGC TATTGTGGAT
TTAGTTTCTA CAGGCAACAC GCTAAAAGCA AATGGTTTAG TTGAGGTTGA GCCCATCGCC
GATATTAGTG CTCGATTGGT GGTCAATCAG GCTTCATATA AGCGTAAACG TGCTCAGCTG
CAACCTATTT TTAAGTTGTT GAAGTAA
 
Protein sequence
MKLTLALSKG RIFEETAEIL SKVGIVPLED PEKSRKLIIE TSNPDVRLII VRASDVPTYV 
QFGGADFGVA GLDALMEKGS DGLYVPYDLN IAKCRMSVAV REGFDYAAAV KQGLRIKVAT
KYVNCAREHF ANKGVHIDTI QLYGSMELAP LVGLADAIVD LVSTGNTLKA NGLVEVEPIA
DISARLVVNQ ASYKRKRAQL QPIFKLLK