| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0086 |
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| Symbol | |
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| ID | 6184198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 79540 |
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| End bp | 80025 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641670828 |
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| Product | Shikimate kinase |
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| Protein accession | YP_001797028 |
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| Protein GI | 171462915 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.744352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.00173966 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCGCCG GGAAGTCGAC CGTCGGCAAA GTCTTAGCAA AAAAATTAGG GCGTCGATTT
CTCGATGCCG ACCATGTTAT TGAAGAGCGT TGCGGCGTAA AAATTCCTGT CATCTTTGAA
ATGGAAGGTG AAGATGGATT TCGCAAAAGA GAGGCCCAAG CTATTCGCGA AATCACCTCT
GAACAAAATA TCGTTTTGGC AACCGGCGGA GGAGCAATTC TGCTTCCAGA AAATCGCCAA
GCATTAAGCG AACATGGCAC CGATATTTAT TTGCATGCCA ATCCAATTGA ACTTTGGCAT
CGCACCAAAG GCGGCGAGGG GCGCCCCCTT CTTAGAAATG GTGACGCCAA AAAAATCTTA
GAAAATTTAT ATTCCATTCG CGACCCACTC TATCGCGAAA TCGCAGACCA CATTATTGAA
ACCGGTAAAC CAAGCGTTAA TCAATTGGTC AACACCTTAA TTATGCAGCT TGAACTTTCC
GCTTGA
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| Protein sequence | MGAGKSTVGK VLAKKLGRRF LDADHVIEER CGVKIPVIFE MEGEDGFRKR EAQAIREITS
EQNIVLATGG GAILLPENRQ ALSEHGTDIY LHANPIELWH RTKGGEGRPL LRNGDAKKIL
ENLYSIRDPL YREIADHIIE TGKPSVNQLV NTLIMQLELS A
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