| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0077 |
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| Symbol | rplQ |
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| ID | 6184164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 71440 |
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| End bp | 71835 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641670819 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_001797019 |
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| Protein GI | 171462906 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.00000148079 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGTCACG GAAACGGCTT ACGCAAACTA AACAGAACAT CATCACATCG CTTGGCGATG
CTACGCAACA TGTCCAATTC ACTCTTGGAG CACGAAGTCA TTAAAACGAC TTTGCCAAAA
GCTAAAGAAT TGCGTATGGT TGTTGAGCCT TTGATTACCT TGGGTAAAAA AGACAACTTA
GCAAATCGTC GCTTGGCATT TAATCGCACT CGTGATCGCG ATTTCGTGAC TAAGCTCTTT
ACAGAGCTCG GCCCACGTTA TGCAACACGT CCAGGTGGCT ACCTTCGCAT TTTGAAGTTT
GGCTTCCGTC ATGGCGATAA TGCGCCGATG GCTTTGGTCG AGTTGGTTGA TCGCCCAGAG
GTTGAAGAAA CAGCAGCAGT AGCTGAAGAG GCTTAA
|
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| Protein sequence | MRHGNGLRKL NRTSSHRLAM LRNMSNSLLE HEVIKTTLPK AKELRMVVEP LITLGKKDNL
ANRRLAFNRT RDRDFVTKLF TELGPRYATR PGGYLRILKF GFRHGDNAPM ALVELVDRPE
VEETAAVAEE A
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