| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0073 |
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| Symbol | rpsM |
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| ID | 6184153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 68885 |
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| End bp | 69250 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641670815 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001797015 |
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| Protein GI | 171462902 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.417836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.00000000329055 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCACGTA TCGCTGGGGT AAATATCCCA AATCATCAAC ATACTGTTAT CGGTCTAACA
GCAATTTTTG GTATTGGCAC AACTCGTGCA CACCAAATCT GCAAGACAAC AGGTGTTGCA
ATCGACAAAA AAGTTAAAGA TCTTATAGAC GCGGACTTGG AAAAGTTACG TGATGAAGTA
GGTAAGTTCG TCACCGAGGG TGATCTTCGT CGTGAAGTAA CTATGAGCAT CAAACGTTTG
ATGGACTTAG GTTGCTATCG CGGCGTTCGT CATCGTAAGG ACTTGCCTGT ACGTGGTCAA
CGTACTAAGA CTAACGCGCG TACCCGTAAG GGCCCACGTA AGTCTGGCGT GCAACTAAAG
AAATAA
|
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| Protein sequence | MARIAGVNIP NHQHTVIGLT AIFGIGTTRA HQICKTTGVA IDKKVKDLID ADLEKLRDEV
GKFVTEGDLR REVTMSIKRL MDLGCYRGVR HRKDLPVRGQ RTKTNARTRK GPRKSGVQLK
K
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