| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0070 |
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| Symbol | |
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| ID | 6182850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 67149 |
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| End bp | 68486 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641670812 |
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| Product | preprotein translocase, SecY subunit |
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| Protein accession | YP_001797012 |
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| Protein GI | 171462899 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.314815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0000000000414881 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCATTAG CACCTACCAA TAACGCAAAC ACTGCAGCAA CGGGCGGCAA GTTTGGCGAA
CTCCGCCAAC GCTTAGTCTT CCTGGTGTTG GCTTTGCTCG TGTTCCGTTT AGGTGCTCAC
ATTCCAGTCT CTGGAATTGA TCCAGACCAA TTGGCGCAGT TATTTTCCGG TCAAAAAGAC
GGCATCTTGG GAATGTTCAA TCTATTCTCA GGCGGCGCTT TATCTCGCTT TACCGTATTT
GCCTTGGGAA TCATGCCTTA CATTTCTGCA TCGATCATCA TACAGTTAAT GACGATTGTT
ATTCCTTCTT TAGAGTCTTT GAAAAAGGAA GGTCAAGCTG GTCAACGTAA GATTGCTCAG
TACACCCGCT ATGGCACAAT GGTATTGGCT ACATTCCAAG CATTGGGTAT TTCTGTTGCC
TTGCAAGCAC AGCCTGGTTT AGTTGTTAAC CCCGGCTTGA TGTTTGAACT CAATACTGTA
GTGACTTTGG TAACTGGCAC GATGTTCTTG ATGTGGCTTG GCGAGCAAAT TACCGAGCGC
GGTTTGGGTA ACGGTATTTC CATCATTATT TTCGGCGGTA TTGTTTCCGG CCTGCCAAAT
GCATTGGCAA GCTTGCTGGA GCTGGTTCGT ACTGGTTCAA TGAATATTGT TTCTGCCTTG
CTGATTGTGG TGATTTGCGT AGCAGTAACT TATTTTGTGG TGTTTGTAGA GCGTGGTCAG
CGTCGCATCT TGGTGAACTA TGCTAAGCGT CAAGTTGGTA ACAAGATTTA CGGTGGCCAG
TCTTCCTACT TCCCGTTGAA GTTAAATATG GCTGGCGTTA TCCCTCCAAT TTTTGCTTCC
TCTATTATTT TGTTCCCTGC AACGATTGCT GGCTGGTTTA CATCAGGCGA GCCAACCAAT
ATGTTTAGCA GAATTATTAA AGACTTAGCC GCTACTTTGG CTCCAGGTCA ACCTGTGTAC
ACCATTTTGT ATGCAGCTGC GATTATTTTC TTCTGTTTCT TCTATACCGC ATTGGTATTT
AACAGCCGTG AGACTGCTGA GAATTTGAAG AAGAGTGGCG CATTCGTTCC AGGCATTCGT
CCGGGCGATC AAACAGCCCG TTATATCGAT AAGATCTTGG TGCGTTTGAC TCTAGCTGGC
TCTATTTATA TGGTTCTGGT TTGCTTATTA CCAGAATTCT TGGTGTTGAA GTACAACGTG
CCGTTTTATT TTGGCGGTAC TTCATTGTTG ATTATTGTTG TTATTGTAAT GGATTTCATA
GCTCAAGTTC AGTCATTTGT TATGCAGCAG CAGTACGGCT CTTTGATGAA AAAAGCCAAT
TTTAAGATGG GCGCTTAA
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| Protein sequence | MALAPTNNAN TAATGGKFGE LRQRLVFLVL ALLVFRLGAH IPVSGIDPDQ LAQLFSGQKD
GILGMFNLFS GGALSRFTVF ALGIMPYISA SIIIQLMTIV IPSLESLKKE GQAGQRKIAQ
YTRYGTMVLA TFQALGISVA LQAQPGLVVN PGLMFELNTV VTLVTGTMFL MWLGEQITER
GLGNGISIII FGGIVSGLPN ALASLLELVR TGSMNIVSAL LIVVICVAVT YFVVFVERGQ
RRILVNYAKR QVGNKIYGGQ SSYFPLKLNM AGVIPPIFAS SIILFPATIA GWFTSGEPTN
MFSRIIKDLA ATLAPGQPVY TILYAAAIIF FCFFYTALVF NSRETAENLK KSGAFVPGIR
PGDQTARYID KILVRLTLAG SIYMVLVCLL PEFLVLKYNV PFYFGGTSLL IIVVIVMDFI
AQVQSFVMQQ QYGSLMKKAN FKMGA
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