| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0067 |
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| Symbol | rpsE |
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| ID | 6184091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 65941 |
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| End bp | 66450 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641670809 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_001797009 |
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| Protein GI | 171462896 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00817055 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00000000000110208 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAACTA AGATGCAAAA CGAAGAGCGT GATGATGGTC TTCGCGAGAA GATGGTTGCT
GTTAATCGTG TAACTAAAGT GGTTAAGGGT GGCCGTATTC TCGGCTTCGC TGCGCTCACA
GTAGTTGGCG ATGGCGATGG CCGCATCGGC ATGGGTAAAG GCAAATCAAA AGAAGTTCCA
GTTGCCGTTC AAAAAGCAAT GGACGAAGCT CGTCGCAAGA TGATCAAAGT AACCTTGCGT
AAAGGTACTT TGCAGCATAC TGTTACTGGT CAACATGGCG CGTCACGCGT TTTGATTTCT
CCAGCCAAAG ACGGTACTGG AATTATTGCT GGTGGCCCAA TGCGTGCGAT TTTCGATGTA
ATGGGTGTAA CAAACGTAGT TGCGAAGTCA CTCGGCTCAA CAAACCCATA CAACTTGGTT
CGTGCAACGA TTGATGGTTT GAGCAAGATG AGCACTCCTG CTGAGATTGC TGCTAAGCGC
GGTAAGTCAG TTGAAGAGAT TCTCGGCTAA
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| Protein sequence | MQTKMQNEER DDGLREKMVA VNRVTKVVKG GRILGFAALT VVGDGDGRIG MGKGKSKEVP
VAVQKAMDEA RRKMIKVTLR KGTLQHTVTG QHGASRVLIS PAKDGTGIIA GGPMRAIFDV
MGVTNVVAKS LGSTNPYNLV RATIDGLSKM STPAEIAAKR GKSVEEILG
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