Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0061 |
Symbol | rplX |
ID | 6184107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 63402 |
End bp | 63710 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641670803 |
Product | 50S ribosomal protein L24 |
Protein accession | YP_001797003 |
Protein GI | 171462890 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0198] Ribosomal protein L24 |
TIGRFAM ID | [TIGR01079] ribosomal protein L24, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000000762997 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1.34485e-17 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAGA TTCGTAAAGG TGATTCCGTA GTTCTGTTGA CTGGCCGCGA TAAGGGCAAG CAAGGAATTG TTACTGCCGT TCTCGAGAAC AAATTAGTGA TCGAAGGCGT AAATATTTAT AAAAAGAGCG TTAAGCCAAA TCCGGCAGCC GGTGTTACTG GCGGCATAAT TGACAAGACG ATGCCTGTTC ACATTTCTAA TGTGGCTTTG GTTGACGGTA ACGGCAAACC ATCACGTGTT GGTATCAAAC TCGTTGACGG TAAAAAGCAG CGTTTCCTCA AAACCACTGG CGCAACTTTA AGCGCATAA
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Protein sequence | MKKIRKGDSV VLLTGRDKGK QGIVTAVLEN KLVIEGVNIY KKSVKPNPAA GVTGGIIDKT MPVHISNVAL VDGNGKPSRV GIKLVDGKKQ RFLKTTGATL SA
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