| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0060 |
|---|
| Symbol | rplN |
|---|
| ID | 6184126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | + |
|---|
| Start bp | 63024 |
|---|
| End bp | 63392 |
|---|
| Gene Length | 369 bp |
|---|
| Protein Length | 122 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641670802 |
|---|
| Product | 50S ribosomal protein L14 |
|---|
| Protein accession | YP_001797002 |
|---|
| Protein GI | 171462889 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0093] Ribosomal protein L14 |
|---|
| TIGRFAM ID | [TIGR01067] ribosomal protein L14, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000000000171332 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1.54022e-17 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATACAAA CCGAAAGTAG ATTACAGGTT GCCGATAACA CAGGTGCCAG TGAAGTGTTG
TGCATCAAGG TATTGGGCGG CTCTGAGCGT CGTTACGCTA GTATCGGTGA TGTCATCAAA
GTCAGCGTTA AGTCTGCTGC TCCACGTGGC CGTGTAAAAA AAGGTGATAT TTATAACGCC
GTAGTAGTGA GAACTGCTAA GGGTGTTCGC CGTCCAGATG GTTCATTGAT TAAGTTCGAT
GGCAACGCTG CGGTATTGCT CAACGCTAAG TTAGAGCCAA TTGGCACACG TATCTTTGGA
CCAGTAACGC GTGAATTGCG TACTGAAAAG TTTATGAAGA TCGTTTCTCT CGCCCCCGAA
GTTATTTAA
|
|---|
| Protein sequence | MIQTESRLQV ADNTGASEVL CIKVLGGSER RYASIGDVIK VSVKSAAPRG RVKKGDIYNA
VVVRTAKGVR RPDGSLIKFD GNAAVLLNAK LEPIGTRIFG PVTRELRTEK FMKIVSLAPE
VI
|
|---|
| |