Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0056 |
Symbol | |
ID | 6183276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 61118 |
End bp | 61933 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641670798 |
Product | ribosomal protein S3 |
Protein accession | YP_001796998 |
Protein GI | 171462885 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000000180668 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 1.0517300000000001e-18 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGACAAA AGATAAACCC AACCGGATTC CGACTCGCGG TAACGAAGAA TTGGACATCA CGTTGGTATG CAAACAATAC TGACTTCGCA AAGATGCTGA AAGAGGACGT AGATGTCCGT AGCTATCTCA AGAAGAAATT GAAGAATGCA TCCGTAAGTA AAGTAGTGAT TGAGCGTCCT GCAAAGAGCG CACGTATCAC CATCTATAGC TCACGTCCAG GCGTTGTAAT CGGTAAAAAA GGTGAAGATA TTGAAGTGCT CCGTCGAGAA TTACAAAAGC GCATGGGCGT TCCGGTTCAC GCAAATATCG AAGAAATTCG CAAGCCTGAA GTTGATGCGC AATTGATCGC TGACTCTATT ACTCAGCAGT TAGAGAAGCG CATTATGTTC CGCCGTGCAA TGAAGCGCGC AATGCAAAAA GCAATGCGTT TAGGCGCACA AGGTATCAAG ATCATGTCGT CAGGTCGTTT GAATGGCGCT GAAATTGCTC GTCGCGAATG GTACCGTGAA GGCCGCGTTC CACTTCATAC CTTGAAGGCT GATATTGATT ACGCAACTTC TGAAGCGGAA ACAACATACG GCATTATCGG CGTAAAAGTT TGGGTATACA AGGGCGACGC ATTGGGTCGT GGTGCAGAAG CTCAAGTTGC TGCACAAGTT GCCGAAGAAA AGAAAACTCG TCGTGCTCCA AGCAAGACAG CTGCTCGCAA ACCAGCTGTT GGCACAGACA AGCCATTAGT TGCTGCTAAA CCAGCAGTAA AGCGTGTGCG TAAGGTTGAA ACACCTGCCG CAGATACGCA GAAGTCAGGA GAGTAA
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Protein sequence | MGQKINPTGF RLAVTKNWTS RWYANNTDFA KMLKEDVDVR SYLKKKLKNA SVSKVVIERP AKSARITIYS SRPGVVIGKK GEDIEVLRRE LQKRMGVPVH ANIEEIRKPE VDAQLIADSI TQQLEKRIMF RRAMKRAMQK AMRLGAQGIK IMSSGRLNGA EIARREWYRE GRVPLHTLKA DIDYATSEAE TTYGIIGVKV WVYKGDALGR GAEAQVAAQV AEEKKTRRAP SKTAARKPAV GTDKPLVAAK PAVKRVRKVE TPAADTQKSG E
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