| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0051 |
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| Symbol | rplD |
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| ID | 6184025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 58707 |
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| End bp | 59327 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641670793 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001796993 |
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| Protein GI | 171462880 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000062417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 3.36643e-25 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACTTA AGCTTCTCCA AGACAACGGT ATTTTAGGCG CAGGCGTACA AGCTTCGCCA
GAAGTATTCG AACGTGAATA CAACGAAGCA TTGGTGCATC AAGTTGTGGT GGCATACCAA
GCAAATGCGC GTAGCGGTAA TCGTGCACAA AAAGACCGTG AGCAAGTTAA GCACACAACC
AAGAAACCTT GGCGTCAAAA GGGTACTGGT CGTGCACGTG CTGGTATGAG CTCTTCCCCG
CTGTGGCGTG GAGGTGGTCG TATATTCCCG AATTCTCCAG AAGAGAATTT CAGCCAAAAA
GTAAACAAGA AAATGTACCG CGCTGGTATG AGATCCATTT TGTCTCAGTT AGCTCGCGAA
GGTCGTTTGA ATGTTATCGA TCAATTCAAT CTTGATGCTC CAAAAACCAA AGTTTTAGCT
GAAAAAATGA AAGCAATGGG CTTGGATTCA GTCTTGATCA TCGTTGATCA GGTTAGTGAG
AACTTGTACT TGGCATCACG TAACTTACAT AAGGTTGCAG TGGTTGAGCC ACAGCACGCA
GATCCATTGG CTTTAGTTCA ATATAAAAAA GTATTGGTAA GTAAAGCTGC GATCACAAAA
ATTGAGGAGT TGCTGAAATG A
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| Protein sequence | MELKLLQDNG ILGAGVQASP EVFEREYNEA LVHQVVVAYQ ANARSGNRAQ KDREQVKHTT
KKPWRQKGTG RARAGMSSSP LWRGGGRIFP NSPEENFSQK VNKKMYRAGM RSILSQLARE
GRLNVIDQFN LDAPKTKVLA EKMKAMGLDS VLIIVDQVSE NLYLASRNLH KVAVVEPQHA
DPLALVQYKK VLVSKAAITK IEELLK
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