| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0050 |
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| Symbol | rplC |
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| ID | 6184043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 58039 |
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| End bp | 58695 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641670792 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001796992 |
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| Protein GI | 171462879 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000105165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 1.58179e-26 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCTTAG GCTTAATCGG CCGCAAGGTC GGCATGACCC GTCTATTTAC GGACGAAGGG
GAAGCGATTC CTGTCACCGT AATCGACGTG AGCGACAACA GAGTCGCTCA AATCAAGACC
CAGGCAACTA ATGGCTATGA TGCTATCCAG TTGGCACATG GCACACGTAG AGCTACTCGC
GTCACCAAAG CAATGGCTGG TCACTTCGCC AAAGCGGGAG TGATGGCTGG TAACGCTCTC
AACGAATTTC ATTTAGACGC AGCAAAGATT GCAGAAATGA CGCCAGGACA AGTAATTCCT
GCAGAAACCG CATTTACTGC TGGTCAAAAG GTGGACGTAC AGGGGGTGAC TATCGGTAAG
GGTTACGCAG GTACCATCAA GCGTTATCAC TTCGCTTCTG GTCGTGCATC CCACGGTAAC
TCACGTTCGC ATAACGTACC AGGCTCTATC GGTATGGCGC AAGATCCAGG TCGTGTTTTC
CCTGGTAAGC GTATGACCGG TCACTTGGGT GACATTACAC GTACAGTTCA AAATTTAGTC
ATCGCACGCA TTGATGCAGA ACGTAATCTC ATCATGGTTA AAGGCGCTAT TCCAGGCGCC
CCAGGCGGTA AAGTTATTGT TACTCCAGCG GTTAAAACAC CGTTGAAGAA GAAATAA
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| Protein sequence | MSLGLIGRKV GMTRLFTDEG EAIPVTVIDV SDNRVAQIKT QATNGYDAIQ LAHGTRRATR
VTKAMAGHFA KAGVMAGNAL NEFHLDAAKI AEMTPGQVIP AETAFTAGQK VDVQGVTIGK
GYAGTIKRYH FASGRASHGN SRSHNVPGSI GMAQDPGRVF PGKRMTGHLG DITRTVQNLV
IARIDAERNL IMVKGAIPGA PGGKVIVTPA VKTPLKKK
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