| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0046 |
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| Symbol | |
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| ID | 6184255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 53576 |
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| End bp | 54046 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641670788 |
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| Product | 30S ribosomal protein S7 |
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| Protein accession | YP_001796988 |
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| Protein GI | 171462875 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0049] Ribosomal protein S7 |
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| TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000000296735 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 6.48919e-23 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCACGTC GTCGTAAAGT TCCCAAACGG GAAATTTTGC CGGATCCAAA ATTCGGCAAT
GTAGAAGTAG CTAAATTCAT GAACGTCCTT ATGTTGGACG GCAAGAAATC GGTTGCAGAG
CGTATCGTTT ATGGTGCCTT TGATCACATC GAGAAAAAAG CAAATAAAGA ACCGCTCGAA
ATTTTTTCAA CAGCCATGGG TAACGTTAAG CCAATGGTTG AGGTTAAGAG TCGTCGTGTT
GGTGGTGCTA ACTATCAAGT TCCTGTTGAA GTTCGTCCAT CACGTCGTTC CGCTTTGGCA
ATGCGCTGGT TGCGTGAGGC CGCCAAGAAG CGTGGCGAAA AATCTATGGC TCAACGTTTA
GCCAACGAAT TATTAGAAGC TGCTGAAGGT CGTGGCGGCG CAATGAAGAA GCGTGAAGAA
GTTCACCGTA TGGCAGAAGC CAACAAAGCT TTCTCACATT TCCGCTTCTA A
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| Protein sequence | MPRRRKVPKR EILPDPKFGN VEVAKFMNVL MLDGKKSVAE RIVYGAFDHI EKKANKEPLE
IFSTAMGNVK PMVEVKSRRV GGANYQVPVE VRPSRRSALA MRWLREAAKK RGEKSMAQRL
ANELLEAAEG RGGAMKKREE VHRMAEANKA FSHFRF
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