Gene Pnec_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0045 
SymbolrpsL 
ID6184021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp53034 
End bp53414 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content47% 
IMG OID641670787 
Product30S ribosomal protein S12 
Protein accessionYP_001796987 
Protein GI171462874 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000913228 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value7.76086e-21 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAACAA TTAATCAATT AATACGCAAG CCAAGAGCAA GGCTTACCGT TAAAAGCAAG 
AGCCCTGCGA TGCAAAACAG TCCGCAGCGC CGTGGTGTCT GTACACGTGT GTATACCACC
ACTCCTAAAA AGCCTAACTC TGCGCTTCGT AAAGTTGCCA AGGTTCGCTT AACCAATGGT
TTTGAAGTGA TTTCATACAT TGGTGGTGAA GGCCATAACC TCCAGGAACA CTCAGTAGTG
TTAATCCGCG GTGGTCGTGT AAAGGACTTA CCAGGTGTTC GTTATCACAT CGTGCGCGGT
TCTTTGGACT TGCAAGGCGT TAAAGATCGT AAGCAAGCCC GTTCTAAATA TGGTGCTAAG
CGCGCTAAGA AAGCTGCTTG A
 
Protein sequence
MPTINQLIRK PRARLTVKSK SPAMQNSPQR RGVCTRVYTT TPKKPNSALR KVAKVRLTNG 
FEVISYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHIVRG SLDLQGVKDR KQARSKYGAK
RAKKAA