| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0028 |
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| Symbol | |
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| ID | 6184071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 28204 |
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| End bp | 29238 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641670761 |
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| Product | fatty acid desaturase |
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| Protein accession | YP_001796971 |
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| Protein GI | 171462858 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3239] Fatty acid desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00913756 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.0000248871 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCCAAG GCGAAACTGG GCGCGCAATC ATGCTTTTGG TCATTGACGC CCTTTTGTGG
CTTGGATACA TCGTGGGAAC TATCTTTGTT GAAAGCATTC TTCTCAAAAT TGTTTTCGGT
GTAATTGCCG GCTTTGTTAC CGGCCGTATT TTTATCTTGG GTCATGACGC TTGCCATCAA
AGCTACACAC CCAATCGTGA ACTTAACAAA GTGTTGGGAC GTATTGCGTT CTTACCCTCT
CTCACACCCT ATAGCTTGTG GGATGTTGGA CACAACATTG TTCACCACGG CCAGACAAAT
CTGAAGGGTT TTGACTTCGT TTGGGCGCCG TTATCAAAAT CTGAATATGA CGCGCTTCCA
TCATGGCGTA AGGCTTTAGA GCGCCTTTAT CGCAGTGGCT GGGGCCCAGT TTTCTACTAC
TTAATTGAAA TTTGGTGGAG ACGCGAGTAC TTCCCAAATG CAAAAAACAA ACCTGGCGAT
CGCCCAATTT TTCTAAAAGA TAATTTGCTC GTTACTGCGT TTGCGATTGT GTGGATTGGC
TGTTTAATTG CTGGCGCCAT TGCAACCGGT CAATCTATTT GGATTGGCTT AATCACTGGT
TTTGCAGTGC CATTCCTATT TTGGAATGGC ATGATCGGAT TTGTTGTTTA CGTTCATCAC
ACCCACCCTA AAGTTTCTTG GTATGACAAG AAATCGGAGT GGTTGCGTGC TCAGCCATTT
ATATCCACAA CGGTCCATCT GACTTTTAAC TGGATTTGGG GCAAATTGAT GCACCACATC
ATGGAGCATA CTGCGCACCA TGTCGATATG AGCGTGCCAC TTTATCGCCT GCCAGAAGCC
CAACAAACCC TGGAAACCAT CCTCCCAGAC CGCATTTTTG TACAAAAGTT CTCTTGGAGC
TGGTATTTCG ATACTGCCCG CAAGTGCAAG CTCTACGACT TTGAAAACAA GGCTTGGCTC
GATTTTGACG GCAATAAAAC GGCTGATTCA GTCCGAGTTG TACTCAGCCC AGCTCCAGCG
GGACAAAACG GGTAA
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| Protein sequence | MAQGETGRAI MLLVIDALLW LGYIVGTIFV ESILLKIVFG VIAGFVTGRI FILGHDACHQ
SYTPNRELNK VLGRIAFLPS LTPYSLWDVG HNIVHHGQTN LKGFDFVWAP LSKSEYDALP
SWRKALERLY RSGWGPVFYY LIEIWWRREY FPNAKNKPGD RPIFLKDNLL VTAFAIVWIG
CLIAGAIATG QSIWIGLITG FAVPFLFWNG MIGFVVYVHH THPKVSWYDK KSEWLRAQPF
ISTTVHLTFN WIWGKLMHHI MEHTAHHVDM SVPLYRLPEA QQTLETILPD RIFVQKFSWS
WYFDTARKCK LYDFENKAWL DFDGNKTADS VRVVLSPAPA GQNG
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