| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0023 |
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| Symbol | atpC |
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| ID | 6184092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 22898 |
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| End bp | 23314 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641670757 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | YP_001796967 |
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| Protein GI | 171462854 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.187642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.000120688 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCAACCA TACGCGTCGA TGTAGTAAGT ACTGAGCAGT CTATTTTCAG CGTGGAAGCC
AAGTTTGTTG CGCTTCCTGG CGAAAGTGGT GAGCTCGGCA TTTTGCGCGG CCACACCCCT
TTGATTACAC GTATTCGTCC AGGTTCGGTT CGTATTGAAA AAGCCGATGA TGATGAAGAG
TTTGTTTTTG TAGCAGGTGG CTATTTAGAG ATTCAGTCGG ATCACGTTAC AGTATTGGCA
GATACTGCTA TTCGCGGTCA TGATCTTGAT GAAGCGAAAG CTATTGAAGC CAAGAAACGC
GCTGAAGAAG CTATGCAAAA CCGTGGCACC GACTTTGATT TGGCTTTAGC CCAATCTGAG
TTTGCAATGG CAGCCGCTCA GCTTGCTGCA ATTGCTCGTT TTCGTCGTAA AAAGTAA
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| Protein sequence | MSTIRVDVVS TEQSIFSVEA KFVALPGESG ELGILRGHTP LITRIRPGSV RIEKADDDEE
FVFVAGGYLE IQSDHVTVLA DTAIRGHDLD EAKAIEAKKR AEEAMQNRGT DFDLALAQSE
FAMAAAQLAA IARFRRKK
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