Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_0021 |
Symbol | |
ID | 6183226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 20551 |
End bp | 21420 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641670755 |
Product | F0F1 ATP synthase subunit gamma |
Protein accession | YP_001796965 |
Protein GI | 171462852 |
COG category | [C] Energy production and conversion |
COG ID | [COG0224] F0F1-type ATP synthase, gamma subunit |
TIGRFAM ID | [TIGR01146] ATP synthase, F1 gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00147934 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.00122657 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAGCA CAAAAGAGAT ACGATCTAAG ATCAAGAGCG TGCAAAACAC GCGCAAGATC ACGAAGGCAA TGGAAATGGT CGCCGCATCT AAGATGCGTC GTGCCCAAGA GCGCATGCGT AATGCGCGTC CATATGCTGA AAAAATTCGT GAGATTGTTG CCAACCTTTC TAAAGCAAAT CCTGGGTTCC GCCCTGCTTA TATGGCAACT CGCGAAGTGA AGAAAGTTGG CACGATTTTG GTTACGACAG ACAAAGGCCT GTGCGGCGGT TTAAATACCA ACGTCTTGCG TTTGATTGCT AACCAAGTGC GCGATTTGCA AGAAAAAAAT ATTGAGATTG CGTACACCGC TATTGGTTCA AAAGGTTTGC AATTTTTGAA TCGCTCAAAA GCAAAACTCA TTTCTCAAAC AATCCAAATT GGTGATATTC CACATATGGA TGTTTTGATT GGTGCAATTG TTAGCCAATT AGAAGCGTTT GAGCGTGGCG AGATTGATGC TGTTTATTTG GCGTACACTC GCTTTGTAAA TGCAATGAAA CAAGAGCCTG TTTTAGAAAA ACTCTTGCCT TTGGAGTCAG AAGCGTTGAC TCCACAAGAG AAAACAGGGA ATTCTTGGGA TTACATCTGC GAACCTGACG CAGAGTCTAT TTTGAATGGC CTGCTTAAGC GTTACGTTGA GGCAATGATT TATCAGGCGG TTGCTGAAAA CATGGCTTCT GAGCAGTCTG CGCGTATGGT CTCAATGAAG GCCGCTTCAG ATAATGCGAA GAACGTAATT GGCGAACTGC AATTGGATTA CAACAAGACA CGGCAGGCTG CTATTACTAA AGAGTTGTCA GAGATTGTTG GTGGAGCGGC TGCGGTTTAA
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Protein sequence | MASTKEIRSK IKSVQNTRKI TKAMEMVAAS KMRRAQERMR NARPYAEKIR EIVANLSKAN PGFRPAYMAT REVKKVGTIL VTTDKGLCGG LNTNVLRLIA NQVRDLQEKN IEIAYTAIGS KGLQFLNRSK AKLISQTIQI GDIPHMDVLI GAIVSQLEAF ERGEIDAVYL AYTRFVNAMK QEPVLEKLLP LESEALTPQE KTGNSWDYIC EPDAESILNG LLKRYVEAMI YQAVAENMAS EQSARMVSMK AASDNAKNVI GELQLDYNKT RQAAITKELS EIVGGAAAV
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