Gene Pnec_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0018 
Symbol 
ID6184051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp17938 
End bp18408 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content50% 
IMG OID641670752 
ProductATP synthase F0, B subunit 
Protein accessionYP_001796962 
Protein GI171462849 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000004073 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.000421111 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAATCTGA ACGCGACCCT ATTCGCGCAA ATGATCGTTT TCTTCGTCTT ATGGTGGGTT 
GTTGCACGTT TCGTGTGGCC GCCGCTAGTA AAGGCGTTAG ATGAGCGTTC AAGCAAAATT
GCTGATGGTT TAGCTGCTGC CGAGCGTGGC AAAGAAGCCC TCGCATTAGC AAGCAATGAA
GCCGAGCAAG AATTAAATAA AGCACGCCAA GAAGGTGTTC AACGTGTTGC CGAAGCTGAA
AAACGTGCAC AAATGTCAGC CGAAGAAATT CGCGCTAACG CACAGGCTGA AGCCGCTCGA
GTCATTTCTC AAGCGCAGCA AGATGCAGCT CAACAAGTCA CACGCGCACG TGAAGTGTTG
CGCGCTGAAG TTGCTGTTCT CGCTGTTAAA GGCGCCGAGC AAATTTTGCG TCGTGAAGTC
GATGCAAAAG CGCACGGCCA ATTGCTTGAC CAACTAAAGG CAGAACTTTG A
 
Protein sequence
MNLNATLFAQ MIVFFVLWWV VARFVWPPLV KALDERSSKI ADGLAAAERG KEALALASNE 
AEQELNKARQ EGVQRVAEAE KRAQMSAEEI RANAQAEAAR VISQAQQDAA QQVTRAREVL
RAEVAVLAVK GAEQILRREV DAKAHGQLLD QLKAEL