| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0012 |
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| Symbol | |
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| ID | 6183978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 11799 |
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| End bp | 13721 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641670746 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_001796956 |
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| Protein GI | 171462843 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00804993 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.00441278 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTTATT CCAAAAATTT CGATGTCATT GTGGTTGGTG GTGGTCACGC CGGTACTGAG
GCCGCCCTCG CTTCAGCGCG CATGGGTTGC GACACACTAT TAATTACACA TAGTATTGAA
AATCTGGGCG CCATGAGTTG CAATCCCTCC ATAGGCGGAA TTGGTAAGGG CCACCTAGTC
AAAGAGATTG ACGCTATGGG TGGCGCTATG GCGGCCGCTA CGGATGAGGC CGGTATTCAG
TTTAGGATTC TTAACTCAAG CAAAGGCCCC GCCGTGCGAG CAACTCGCGC CCAGGGCGAT
CGAGTTCTAT ATAAGGCGGC CATTCGCCGT CGTTTAGAAA ACCAACCCAA TTTAAGCCTT
TTTCAAGCTG CGGTTGATGA CTTGCCGGTT AAGGGCGATG AGGTTCAGGG GGTTGTCACG
CAAATGGGTC TGGAGTTTAT GGCCAAAAAG GTGGTTCTCA CAGCAGGCAC CTTTTTGGAT
GGCAAGATCC ATGTTGGTTT AAATAATTAT GCTGGTGGTC GCGCTGGCGA TCCAGCGGCC
GTCTCGTTAT CTGCAAGGCT TAAAGAGTTA AAACTTCCTC AGGGGCGGCT TAAGACCGGC
ACCCCGCCCC GGATTGACGG TCTGACCATC GACTTTTCGG TGATGTTGGA GCAGCCTGGG
GATTTAGATC CTGTACCAGT ATTTTCTTAT TTAGGGCGTC CGGAGCAGCA TCCTAAGCAG
GTTCCTTGTT GGATTTCGCA CACTAACGAG AAAACTCACG ACATTATTCG TGGCGGTTTA
GATCGTTCGC CAATGTATAC CGGTGTGATT AAGGGGGTTG GTCCCCGTTA CTGCCCTTCC
ATTGAGGACA AAATTCACCG TTTTGCCTCC AGAAACAGTC ACCAGATCTT TTTGGAGCCA
GAAGGCTTAA CAACCAATGA GTTTTATCCT AACGGAATCT CTACTAGCCT GCCTTTTGAT
GTGCAATGGG ATTTGGTTCG CAGTATTCGC GGCATGGAGT CTGCGGTTAT TGTGCGTCCA
GGCTATGCCA TTGAGTACGA TTTCTTTGAT CCGCGCCAGC TGCGCCATAG CCTGGAGACA
AAAGTGATTG GCGGCCTCTA CTTCGCTGGC CAGATTAACG GCACCACTGG ATACGAAGAG
GCTGCAGCGC AAGGAATGTT AGCTGGAATC AATGCTGGTT TAGCCGCCAA AGGCAAGGAG
CCTTGGTTGC CAAAGCGTAG CGAGTCTTAT ATTGGTGTTT TGGTGGACGA CTTAATTGCT
CGTGGCGTTC AAGAGCCCTA TCGCATGTTT ACAAGTCGGG CTGAATACCG TTTGAGTTTG
CGGGAAGACA ACGCCGATAT GCGCTTAACC GCTATTGGGC GAGATCTGGG CCTTGTTGAT
GACTATCGCT GGGGGGTATT TTGCAGAAAA CAAGAGGCTG TTTCACGTGA AACATCTCGC
TTGCAAAATA TTTGGGTGGG GCCCAAGAGT GAAGCGGCCC CCTTTGTTTC TCAACTATTG
GACCAAGATC TTTCACACGA AAGTAGTTTG GCAGAGCTTT TAAGGCGCCC AGGCGTTACT
TATGAGTCGA TTATTGCGCT TGGTGATGGA ATGTGGGCCC CAGAAACTTT AGATGAAGAT
CTGGGCTTGG CTGCGCAAAT TAGTGATCAA GTGGAGATTT CGGTGAAGTA TCAGGGTTAT
ATTGAGCGTC AGGCGACTGA AATCGCTCGC CAAGAGCACA ACGAGACACT CCTGTTGCCA
GAATCGCTCG ATTATTCCCA GGTTATTGGG CTCTCCAAAG AGGTTCAGCA AAAACTGAAT
TTGCATAAGC CTGAAACATT GGGCCAGGCG GGAAGAATTT CCGGCGTAAC TCCTGCGGCA
CTCTCCCTTC TGTTGGTTCA CCTTAAAAAA GATTTGGGCC ACACCCAAGA AGCACATGAG
TGA
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| Protein sequence | MRYSKNFDVI VVGGGHAGTE AALASARMGC DTLLITHSIE NLGAMSCNPS IGGIGKGHLV
KEIDAMGGAM AAATDEAGIQ FRILNSSKGP AVRATRAQGD RVLYKAAIRR RLENQPNLSL
FQAAVDDLPV KGDEVQGVVT QMGLEFMAKK VVLTAGTFLD GKIHVGLNNY AGGRAGDPAA
VSLSARLKEL KLPQGRLKTG TPPRIDGLTI DFSVMLEQPG DLDPVPVFSY LGRPEQHPKQ
VPCWISHTNE KTHDIIRGGL DRSPMYTGVI KGVGPRYCPS IEDKIHRFAS RNSHQIFLEP
EGLTTNEFYP NGISTSLPFD VQWDLVRSIR GMESAVIVRP GYAIEYDFFD PRQLRHSLET
KVIGGLYFAG QINGTTGYEE AAAQGMLAGI NAGLAAKGKE PWLPKRSESY IGVLVDDLIA
RGVQEPYRMF TSRAEYRLSL REDNADMRLT AIGRDLGLVD DYRWGVFCRK QEAVSRETSR
LQNIWVGPKS EAAPFVSQLL DQDLSHESSL AELLRRPGVT YESIIALGDG MWAPETLDED
LGLAAQISDQ VEISVKYQGY IERQATEIAR QEHNETLLLP ESLDYSQVIG LSKEVQQKLN
LHKPETLGQA GRISGVTPAA LSLLLVHLKK DLGHTQEAHE
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