| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0010 |
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| Symbol | |
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| ID | 6184063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 9917 |
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| End bp | 10846 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641670745 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001796955 |
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| Protein GI | 171462842 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.00370487 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCCAA AAACAAAGCT ACTTTATGGA ATTTTGGTCC TAATTGGGTT GTTGCTGCCC
TTCCAAGATT GTATTTATCT TGTGTTTGCA ATGAAGGTTT TGTGTTTTGC TTTATTTGCC
TGCGCATTTA ATTTGCTGCT TGGCTTCACA GGCCTTTTAT CTTTTGGTCA TGCCGCTTTC
TTTGGGACCG CCGCTTACAT TACTGCATAC CTTTGTAAAG AGGCTGGCTT TTCCCCTGAG
TTGGGTATCG TGCTAGGTGT TGCTGGTTCT GGAGTTTTTG GCTTTCTAAT TGGTTTATTG
GCTATTCGTA GGCAAGGCAT CTACTTTGCG ATGGTGACTT TGGCGCTATC ACAAATGGTT
TACTTCCTTG CCGTGCAGCT GCCATTTACC GGTGGTGAGG ATGGCATTCA AGGTGTGCCT
CGCGGAATGT TGTTTGGTTT TATTGGCCTA AAAGATGACG TAGCGATGTA TTACTTTGTA
CTGACTGTTT TCTTGTTTGG TTTTGCGTTG ATCATGCGCG CAGTTCATTC ACCATTTGGT
CAAGTGCTTA AGGCCATTCG TGAGAATGAG CCCCGCGCAA TTTCTTTGGG TTATGACGTT
GATCGATTTA AATTAATGTC CTTCGTAATT TCTGCAGCAC TTTCTGGTTT GGCTGGATCA
ATGAAGTCCT TGGTGTTCCA GTTAGCAACC CTAACGGATG CTCATTGGCA TATGTCTGGC
GAGGTTGTAT TGATGACTTT ACTTGGTGGT ATGGGCACCA TTTTTGGACC AGTTGTTGGC
GCAGGAATTG TTGTGGGCTT GCAAAACTAT TTGGCCAACA TTGGATCCTG GAGCACGATT
GCAACCGGCT TTATTTTTGT AATTTGTGTT TTGGTTTTCC GTCGTGGCGT TGTTGGTGAA
ATTGTTGCGC ACTTCAAAAA CAAAAATTAG
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| Protein sequence | MNPKTKLLYG ILVLIGLLLP FQDCIYLVFA MKVLCFALFA CAFNLLLGFT GLLSFGHAAF
FGTAAYITAY LCKEAGFSPE LGIVLGVAGS GVFGFLIGLL AIRRQGIYFA MVTLALSQMV
YFLAVQLPFT GGEDGIQGVP RGMLFGFIGL KDDVAMYYFV LTVFLFGFAL IMRAVHSPFG
QVLKAIRENE PRAISLGYDV DRFKLMSFVI SAALSGLAGS MKSLVFQLAT LTDAHWHMSG
EVVLMTLLGG MGTIFGPVVG AGIVVGLQNY LANIGSWSTI ATGFIFVICV LVFRRGVVGE
IVAHFKNKN
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