| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0009 |
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| Symbol | |
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| ID | 6184057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 8994 |
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| End bp | 9914 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641670744 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001796954 |
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| Protein GI | 171462841 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.978164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.0292693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAAC TTCTTGGAAT TACCCCTCAA GGGCTGGTAG CCCAGCTCTT GGTGGGGCTT
ATTAATGGCT CGTTCTATGC CATATTGAGT TTAGGATTGG CCATTATTTT TGGCCTTCTC
AACATCATTA ACTTTGCACA TGGTGCGCAA TACACCATGG GTGCTTTTAT TGCCTGGATT
GGTTTAACCC AGATTAGCCA ATGGCTTGGC TTTCCTGAGT TGTCTATCAA TTACTGGTTT
GCATTAATTA TTGTCCCGCT GGTATTGGCG GGCTTCGGCC TAATTCTTGA GCGCACGATG
CTGCGCCGCC TTTATCACTT AGACCACTTA TATGGTCTTT TACTGACTTT TGGTTTGGCA
CTCATTATTG AGGGCATGTT CCGTCATTGG TGTGGAATCT CTGGCGAGAG CTACCCAGCC
CCAGAAATGT TGCAGGGCGC AATTCCTCTC GAGTCTATCG GCATCATTTT GCCGAAGTAT
CGTGTCTGGG TGGTGGTTAT CTCCCTGGTA GTTTGCTTCT CCACTTGGTA TGTGATTGAA
AGAACTAAGC TTGGCGCCTA TTTGCGCGCC GGAACCGAAA ACCCTAAATT ACTGCAGGCT
TTTGGCATCA ATGTTCCTTT AATGATTTCT TTGGCTTACG CCTATGGCGT TGGCCTTGCT
GGTTTTGCTG GTGTTTTGGC CGCCCCTATT TTTCAAGTAA ATCCATTGAT GGGGTCCAAC
CTCATCATTG TGGTTTTTGC GGTGGTGGTG ATTGGCGGCA TGGGTTCTAT CATGGGCGCC
ATTCTGACTG GTTTGGGTTT AGGTCTCGTT GAGGGTCTTA CTAAGGTCTT TTATCCAGAA
GCTTCTGGCG TTGTGATTTT TGTGATCATG GCCATTGTTC TATTGATTCG TCCTGCTGGA
CTGTTTGGGC GGGAGAAATA A
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| Protein sequence | MFELLGITPQ GLVAQLLVGL INGSFYAILS LGLAIIFGLL NIINFAHGAQ YTMGAFIAWI
GLTQISQWLG FPELSINYWF ALIIVPLVLA GFGLILERTM LRRLYHLDHL YGLLLTFGLA
LIIEGMFRHW CGISGESYPA PEMLQGAIPL ESIGIILPKY RVWVVVISLV VCFSTWYVIE
RTKLGAYLRA GTENPKLLQA FGINVPLMIS LAYAYGVGLA GFAGVLAAPI FQVNPLMGSN
LIIVVFAVVV IGGMGSIMGA ILTGLGLGLV EGLTKVFYPE ASGVVIFVIM AIVLLIRPAG
LFGREK
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