| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_0007 |
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| Symbol | |
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| ID | 6184048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 7024 |
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| End bp | 7728 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641670742 |
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| Product | ABC transporter related |
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| Protein accession | YP_001796952 |
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| Protein GI | 171462839 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.0678223 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA TGGCATTAGA AGTTAAAAAT CTAGAGTCTT GGTATGGCGA GTCACACATC
TTGCACGGTG TTAATTTCGC TGTTCGTGAT GGTGAGGTAG TTACTTTGTT GGGTAGAAAT
GGTGCCGGGC GAAGCACCAT TCTAAAAACC ATTTTGGGTT TAACCAGCAA AAGAACGGGT
TCTGTAGAGA TTTATGGCAC AGAAACAATC TCGATGCCCA CATACAAGAT TGCGCGTTTG
GGTGTTGGCT TTTGCCCTGA GGAGCGCGGC ATCTTCGCCA GCTTAAGCAC GAAAGAAAAT
TTATTGCTTT TGCCAGAGAT TGCTCCGGGA GGCATGGGTT TGGATGAGAT ATATGAGATG
TTTCCAAACC TCTATGAGCG AAGAAATAGT CCTGGCACCC GCTTGTCTGG TGGTGAGCAA
CAAATGCTAG CAATGGCGCG AATCTTGAGA ACCGGCGCCA AATTGTTGTT ACTAGATGAG
ATTACCGAAG GCTTGGCCCC AGTGATTGTG CAAAAATTGA GCGAAGTAGT TACTAGCTTG
CGCAACAAGG GCTTCACCAT TGTGCTGGTT GAGCAGAATT TCCGTTTTGC AGCGCCATTG
GCAGACTGCC ATTATGTTGT TGAGCATGGG AATGTGGTTG AGATTGTAAG TCAGAATGAG
CTTGCTGAAA AAGCGGCTCT TTTAAATGAG TATCTTGGTG TTTAG
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| Protein sequence | MSTMALEVKN LESWYGESHI LHGVNFAVRD GEVVTLLGRN GAGRSTILKT ILGLTSKRTG
SVEIYGTETI SMPTYKIARL GVGFCPEERG IFASLSTKEN LLLLPEIAPG GMGLDEIYEM
FPNLYERRNS PGTRLSGGEQ QMLAMARILR TGAKLLLLDE ITEGLAPVIV QKLSEVVTSL
RNKGFTIVLV EQNFRFAAPL ADCHYVVEHG NVVEIVSQNE LAEKAALLNE YLGV
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