Gene Pnec_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0005 
Symbol 
ID6183815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp5935 
End bp6150 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content51% 
IMG OID641670740 
Producthypothetical protein 
Protein accessionYP_001796950 
Protein GI171462837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.711557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.0680728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTTG TCACAATTCA AGAACTCGAG GCCGCCATTA ATTACTGGCG CAGCCAGTCG 
CCCTCAGAGG GGAATGAGTT GCGCCTTTGT GCCGAGGCGT CGGCGCTAGC AAAGCCTTAT 
GCACTGATGA TTGTTCAGGG CGCCCAACGG ATGCCGGTAG ATGTTCTTGA TGGATTGGCT 
CGCTCAGCAA TTCAGAAGTT TCAAAATATC TCCTAA
 
Protein sequence
MLFVTIQELE AAINYWRSQS PSEGNELRLC AEASALAKPY ALMIVQGAQR MPVDVLDGLA 
RSAIQKFQNI S