| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_2008 |
|---|
| Symbol | rfc |
|---|
| ID | 6165616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 1767259 |
|---|
| End bp | 1768245 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641669171 |
|---|
| Product | replication factor C small subunit |
|---|
| Protein accession | YP_001795368 |
|---|
| Protein GI | 171186449 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAGC TGTTTTGGTT TGAGAAGTAT CGTCCTCGTT CGTTTGATGA GGTGGTGGAT
TTGGAGGAGG TTAAGAGTCG GCTTAGGGAG TTTGTGAGGA GTGGTAATAT GCCGCATCTC
TTGTTTTACG GCCCTCCTGG GACTGGGAAG ACCACCATGG CTCTTGTCTT GGCGAGGGAG
CTCTACGGCG AGTACTGGCG TGAGAATACG CTGGAGCTCA ACGCCTCAGA CGAGAGAGGT
ATAAACGTGA TACGGGAGAG GGTGAAGGAG TTCGCCCGCA CAGCCCCAAT CAAAGCCCCC
TTCAAACTAG TCATACTAGA CGAGGCAGAC AACATGACAA GCGACGCCCA ACAAGCCCTC
AGAAGAATAA TGGAAATATA CGCACAAAAC ACAAGATTCA TACTACTGGC AAACTACGTT
TCACGTATCA TAGACCCCAT AATCTCTAGA TGCGCCGTGT TCCGCTTCTC TCCCATGCCA
CGGAGTTTGA TGGCGGAGAG GTTGAAATAC ATCGCCAAGA GGGAGGGTAT AGAGGTTGGA
GAAGACGCTC TGGACTTAAT CTACGAGCTT TCCGAGGGCG ATATGCGGAA GGCGATAAAC
CTGCTCCAGG TCGCCGCGGC GACGAACAAG GTCGTAGACG CAAACGCTGT TGCAGCCGCC
GCTGCCGCGG TTAAGCCCTC CGACATCCTC GAGCTGTTTA ACCTAGCGCT TGGGGGCGAC
TATCTGAAGG CCAGAGAAAA GCTAAGGGAG CTTATGTACA TAAAGGGCGT GGCGGGCGTG
GACTTCATAA GGGCTTTCCA GAGAGAGCTT ATCCGTATGC CCCTCGACGA CGATCTAAAG
GCCGAGATAG CGGAGTTGCT TGCCGATGTT GACTACAGGC TGACTCAGGG GGCTGACGAG
GAGATCCAGA TGGCGTATCT ACTTGCAAAA CTCGGCTCCA TAGGCAAGAG AGCCAAGCCT
GGGGCTGCCC CGACCAAGAA GAGGTGA
|
|---|
| Protein sequence | MAELFWFEKY RPRSFDEVVD LEEVKSRLRE FVRSGNMPHL LFYGPPGTGK TTMALVLARE
LYGEYWRENT LELNASDERG INVIRERVKE FARTAPIKAP FKLVILDEAD NMTSDAQQAL
RRIMEIYAQN TRFILLANYV SRIIDPIISR CAVFRFSPMP RSLMAERLKY IAKREGIEVG
EDALDLIYEL SEGDMRKAIN LLQVAAATNK VVDANAVAAA AAAVKPSDIL ELFNLALGGD
YLKAREKLRE LMYIKGVAGV DFIRAFQREL IRMPLDDDLK AEIAELLADV DYRLTQGADE
EIQMAYLLAK LGSIGKRAKP GAAPTKKR
|
|---|
| |