| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1983 |
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| Symbol | |
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| ID | 6165618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 1745258 |
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| End bp | 1747453 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641669147 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_001795344 |
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| Protein GI | 171186425 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family
[TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.338753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGAGT GGATAGAGCT TAGAGTTCTA GAGAGCAAGG CCCGGGACGC CAACCGTCCC
GTCGTTAGGA TTGACCCCGA GGTCATGGAG AAGTCCGGGA TAGTAGTCGG CGACGTGGTG
GAGATAGTCG GCCGCAGGAG GACCGCGGCT AAGGTGTGGA ACGGGCTTCC CGAGGACCGC
GGCCGTGGCG TCATCCGGAT GAACAGCATC TTGAGGAAGA ACGCAGACGT GTCCCTCAAC
GAGACGGTTA GAGTGAGGAA GGTTGAGCCA AAGCCCGCGG CCTTTGTCAA ACTCGCCCCC
GTTTCAATGA CCATCGCCGT AGATGCCAAC TTCCTACAGT ACATAAAGCA GAGGCTTAGG
GAGTACATCG TCGTCGAAGG CGATATGTTG CAGATCTATG TGCTGAGCCA GCCGCTGACG
TTCCAGGTGG TTCAGACCAA GCCGTCAAAC GCGGTGTTAG TCATCACGGA GGACACCCAG
ATCCAGATCT TTGAAAAGCC CGTCTCCGGC GTTAGGATAC CCCACGTGAC CTGGGAGGAT
ATTGGTGATT TGGAGGATGC TAAGCAGAAG ATTCGTGAGC TTGTGGAGCT TCCTCTTAGG
CATCCTGAGT TGTTTAAGCA TTTGGGTATT GAGCCTCCGA AGGGTATCCT CTTGATTGGC
CCTCCGGGCA CTGGCAAGAC CCTCCTCGCC AAGGCTGTGG CTAACGAGGC TAACGCCTAC
TTCGTCGCCA TAAACGGCCC CGAGATCATG TCTAAGTACT ACGGCGAGTC AGAGGCGCGG
CTTAGGGAGA TCTTCGAAGA GGCGAAGAAG AACGCCCCCG CCATAATCTT CATAGACGAG
ATAGACGCCA TAGCCCCCAA ACGCGAGGAG GTCACGGGGG AGGTGGAGAA GCGGGTGGTG
GCCCAGCTAC TAACCCTAAT GGACGGGCTA CAAGAGAGAG GACAGGTAGT GGTAATAGGA
GCAACCAACC GCCCAGACGC AGTAGACCCA GCGTTGAGAA GACCAGGAAG ATTCGACAGA
GAGATCTGGA TAAACCCGCC GGACTTCAAG GGGAGGTATG AGATCCTCCT GATCCACACC
AGGAACATGC CTCTTGCCCC AGACGTAGAT CTTAGGAAGC TTGCTGAGAC GACCCACGGC
TTCTCCGGAG CGGATCTGGC GGCGCTTGCG AGAGAGGCCG CGATGTCTGC CCTCAGGAGG
GCGATACAGA GCGGTCTGAT AGACCTCAAC CAGCCCACTA TCCCGCCTGA GACGTTTGAG
AAGATCAAGG TGACAATGGC CGATTTCGTC AACGCGCTTA GGGAGATAGT TCCGTCTGCG
CTGAGGGAGA TACACATAGA GGTTCCCAGA GTCCGCTGGG AGGACATAGG AGGGTTGGAG
AACGTAAAAC AGGAGTTGAG AGAGGCCGTG GAGTGGCCGT TGAAGTACCC AGATAAGTTC
AAGAAGTTTG GCCTTAGGCC TCCCAAGGGC ATACTGCTCT TCGGGCCGCC CGGCACCGGC
AAGACGCTTC TGGCTAAGGC CGTGGCCACC GAGTCCGGCG CCAACTTCAT AGCAGTTAGG
GGGCCCGAGA TCTTCTCCAA GTGGGTGGGG GAGTCGGAGA AGATGGTTAG GGAGATATTT
AGGAAGGCTC GGATGGCCGC GCCAGCCGTG ATATTCATCG ACGAGATAGA CGCGCTGGCC
ACAGCCAGGG GTTTCGGCGG CGATTCGCTG GTGAGCGAGC GCGTTGTGGC GCAGCTACTA
GCCGAGATGG ACGGCGTTAA AGCTCTGGAG AACGTGGTGG TTATCGCGGC TACAAATAGG
CCCGATCTCG TCGACCCGGC GTTGCTGAGA CCCGGCCGCT TTGACAGGAT AATATACGTG
CCCCCGCCCG ACTTCAAGGC CAGGCTGGAT ATCTTGCTTA TACATACGAG GACGACCCCG
CTCTCTAAAG ACGTAGACCT GGAGGAGCTT GCGCGTAGGA CAGAGGGTTA CTCCGGCGCC
GATCTAGAGC TACTCGTGAG AGAGGCCACC TTCCTGGCGC TACGGGAGGA TATAAACGCG
AGGGAGGTCT CGATGCGCCA CTTCGAGGAG GCGCTTAAGA AGGTTAGGCC CTCCATAGCG
CTTGACATGT TGAAGTTCTA CGAGACCTGG TTGGAGAAGG CGAGGCAACT TCACGTGGCG
GCTAAGGCAA AGGCCACGCC GCCTCTATAT CTATGA
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| Protein sequence | MSEWIELRVL ESKARDANRP VVRIDPEVME KSGIVVGDVV EIVGRRRTAA KVWNGLPEDR
GRGVIRMNSI LRKNADVSLN ETVRVRKVEP KPAAFVKLAP VSMTIAVDAN FLQYIKQRLR
EYIVVEGDML QIYVLSQPLT FQVVQTKPSN AVLVITEDTQ IQIFEKPVSG VRIPHVTWED
IGDLEDAKQK IRELVELPLR HPELFKHLGI EPPKGILLIG PPGTGKTLLA KAVANEANAY
FVAINGPEIM SKYYGESEAR LREIFEEAKK NAPAIIFIDE IDAIAPKREE VTGEVEKRVV
AQLLTLMDGL QERGQVVVIG ATNRPDAVDP ALRRPGRFDR EIWINPPDFK GRYEILLIHT
RNMPLAPDVD LRKLAETTHG FSGADLAALA REAAMSALRR AIQSGLIDLN QPTIPPETFE
KIKVTMADFV NALREIVPSA LREIHIEVPR VRWEDIGGLE NVKQELREAV EWPLKYPDKF
KKFGLRPPKG ILLFGPPGTG KTLLAKAVAT ESGANFIAVR GPEIFSKWVG ESEKMVREIF
RKARMAAPAV IFIDEIDALA TARGFGGDSL VSERVVAQLL AEMDGVKALE NVVVIAATNR
PDLVDPALLR PGRFDRIIYV PPPDFKARLD ILLIHTRTTP LSKDVDLEEL ARRTEGYSGA
DLELLVREAT FLALREDINA REVSMRHFEE ALKKVRPSIA LDMLKFYETW LEKARQLHVA
AKAKATPPLY L
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