| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1965 |
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| Symbol | |
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| ID | 6164463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 1733342 |
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| End bp | 1734481 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641669128 |
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| Product | DNA-directed RNA polymerase subunit A'' |
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| Protein accession | YP_001795326 |
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| Protein GI | 171186407 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02389] DNA-directed RNA polymerase, subunit A'' |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000112619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCTA AACAGGAGCT CCTAGCTAAG ATCTCAGCTG TGTTGCCGCA GCCGCTGTAT
AGGGAGCTGG AAAACGCGGT AAAGGACCTA GACGAGGAGA GAGCTCTGCG CCTTATACAC
CGCGTCCTTA GGCTATACAT CACGTCGCTT GTCGACCCGG GGGAGGCCAT CGGCATAGTG
ACGGCGCAGT CGATAGGAGA GCCCGGCACC CAGATGATCC TACGCTCTTT CCACTACGCG
GGTCTGAGGG AATTCTCCAT GGCAAGAGGT CTGCCGAGGC TTATAGAGAT CGTAGACGCC
AGGAGGACGC CCTCTACGCC GCTGATGTTT GTGTATCTAA AGCCGCCCTA TAACAAGAAC
AGGGAAGCCG CCGAGACCGT GGCCAAGAGG ATACAGCAGG TTACGCTGGA GATGTTGGCG
AAGGAGGTGG ACGTGGATTA TGTGGCCGGC ACAATCACAA TAACCCTAGA CCAGGAGCAG
CTGAAGTACC GCGGGCTGAG CTTGAAGGAC GTGGAGAGGG TAGTCACAAA GACGAAGGGG
AAGGACATGG CGGTGTCGAT GCGCGGCTCC ACGATTACGG TATCGCTCAC GACCCCCGAC
ATTTTGAAGA TGAGGAAGAT ACGGGATAAG GTGCTCCAGA TCAGAATATC GGGCATTAAG
GGCATAAGAA AGGTCGTCCT ACAGCACGAT TCAAAAAACG ACGAGTGGTA TATAGTTACT
GAGGGGTCCA ACCTAGAGGC TGTGCTTCAG CTAGAGGAGG TAGACCAGTC GAGAACCTAC
AGCAACGATC TGCACGAGGT TGAGGAGGTC CTCGGCATTG AGGCAGCTAG GGCGCTTGTG
GCGCAAGAGA TAAAGCGCGT GCTTGAGGAG CAAGGCCTTG ACGTAGACAT TAGACATATG
TATCTTGTGG CCGACACCAT GACGTGGTCG GGTAGGCTGA AGCCTATTGG ACGCCACGGG
GTGGTTGGAG CTAAGGAGTC GCCTCTGGCC AGGGCGGCGT TTGAGGTAAC TGTGAAAACC
TTGGTGGAGG CCTCGGTGAG GGGGGAGGAG GAGCAGTTCA AGGGCGTTGT TGAAAACATC
GTAGCGGGGA GGTACGTGCC GGTGGGCACA GGCATAGTCC GCCTACTGAT GCAGTTCTAG
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| Protein sequence | MISKQELLAK ISAVLPQPLY RELENAVKDL DEERALRLIH RVLRLYITSL VDPGEAIGIV
TAQSIGEPGT QMILRSFHYA GLREFSMARG LPRLIEIVDA RRTPSTPLMF VYLKPPYNKN
REAAETVAKR IQQVTLEMLA KEVDVDYVAG TITITLDQEQ LKYRGLSLKD VERVVTKTKG
KDMAVSMRGS TITVSLTTPD ILKMRKIRDK VLQIRISGIK GIRKVVLQHD SKNDEWYIVT
EGSNLEAVLQ LEEVDQSRTY SNDLHEVEEV LGIEAARALV AQEIKRVLEE QGLDVDIRHM
YLVADTMTWS GRLKPIGRHG VVGAKESPLA RAAFEVTVKT LVEASVRGEE EQFKGVVENI
VAGRYVPVGT GIVRLLMQF
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