| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1964 |
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| Symbol | |
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| ID | 6164357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 1730691 |
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| End bp | 1733345 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641669127 |
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| Product | DNA-directed RNA polymerase subunit A' |
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| Protein accession | YP_001795325 |
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| Protein GI | 171186406 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02390] DNA-directed RNA polymerase subunit A' |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0180439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTTAA GGGGGGAACT TGACACTATC CCGCGAAAGG CGATTAAGTC CATCAAGTTC
GGGATCCTAA GCCCGGAGAT GATACGTAAG TACTCGGTGA TGGAGGTGAC GACTTCCGAG
GTCTACGACG AGGGCGGCTT GCCTGTTCGC GGCGGGATTG CCGACCGCAG GCTCGGCGTT
GCCGAACCCG GCGCCAGGTG CGAGACCTGC GGCCAGACCC ACGACGTGTG CCCAGGTCAT
TTCGGGCATG TTGAGCTCGT GAAACCCGTT ATCCATGTGG AATACGCCAG GATCATATAC
GACGTCTTGA GAACCACCTG TCCCAACTGC GGCCGGATAA TGTTGAAAGA CGAGGAGATA
CAGCGTTACA GGGAGAGGTT GACGAAGCTG AAGAGCAAGT GGAGGCTTTT GGCCATGAAT
CTACATGAGA AGATCAGGAA GAAGGCCTCG GAGAGGATGA CGTGTCCCCA CTGCGGCTAC
AAGAGGAATA AGGTGCGGTT TGAGAGACCG TACTACTTCT ACGAGGAGAC TGAGGAGGGG
GCTCTCGTGA AGCTGGATCC CGAGGTCCTA AGGGATAGGC TTGCCAAGGT GCCCAACGAG
GACCTGGAGC TCCTTGGGCT TAACCCCTCG GTTGCTCGTC CCGAGTGGGC GATTTTGAAG
GTCCTTCCCG TGCCGCCTCC GCATGTGCGG CCCTCGATAC AGCTGGAGAC AGGCATCCGC
TCCGAGGACG ACCTAACCCA TAAACTCGTC GACATCATTA GGATGAACGA GAAGCTTAAG
ATAGCTATTG AAACCGGCGC GCCGACAAAC GTGGTGGACA ACCTGTGGGA CCTCCTGCAG
TACCACGTGG CGACCTACTT CGACAACGAG CTACCCGGGA TCCCAGTGGC TAAACACAGG
GGCGGGAGGC CGTTAAAGGG GATTGCACAG CGCTTGAAGG GTAAGGAGGG GAGGTTCCGC
GGCTCTCTCT CCGGCAAACG TGTGAACTTC TCGGCGCGTA CAGTCATAAG CCCAGACCCC
CACATTAGTA TAAACGAGGT GGGGGTTCCC TACGACATAG CCAAGATTCT GACAGTACCC
GAGAGGGTGA CCGAGTGGAA CGTAGACGTG CTTAGGGAGT ACGTGATGAG GGGGCCCGAG
ACTTGGCCAG GAGCCAACTA CGTGATTACC CCGGAGGGCA GGAGGATCGA CCTGCGGTAC
GTCAAGGACA AGAGGGCGCT GGCCGAGAGG CTTGCCCCCG GCTGGATTGT GGAGAGACAC
CTAGTAGATG GGGATATTGT TCTCTTCAAC AGGCAACCGA GCCTCCACAG GGTCTCCATA
ATGGGCCACA TCGTGAAGGT GCTCCCGGGG AGGACTTTTA GGCTACACCT CGCCGTATGT
CCGCCCTACA ACGCCGATTT CGACGGCGAC GAGATGAACT TGCACGTGCC TCAGACGGAG
GAGGCCAGGG CTGAGGCGAG GACTCTGATG TTGGTGGAGA AGCACATAAT TACCCCGCGC
TACGGCGGCG CCATAATCGG CGCTAGGCAA GACTACATAA TAGGGGCGTA CCTCCTCTCT
CAGAAGTCGA CGTTTCTTAC GAAGAAGGAG CTGGCTTATC TCCTCGGCGC TGGGAAATCC
ACGGAGGATC CGCCGGAGCC GGCTTTCCTA CACCCCGTGG AGCTCTGGAC TGGGAAGCAG
GTCATTTCCC ACTTCCTGCC GAAGGATCTA AATTGGGTTC AGCCGACAGC CTTTAAGTCT
AAATGCCAAG ACGCCTATAG GTGCGCCGGC GATGAATGGA TCATAATAAT TAACGGCGTT
ATGGTGAAGG GAGTGCTGGA CAAGAAGTCC ATCGGTGCAG AGCAGGTGGA CTCCCTCTGG
CACAGGATAG CCCGCGACTA CCCGCCGGAG GTCGCTAGAA GGTGGCTCGA CTCCTCCCTT
AGGCTCTTCC TTAGGTACCT AGACCTACGG GGCTTCACCT TCGGGATAGA TTCCGTGTAT
CTACCTCCCG AGGCCTATGG CGAGATTGAC GCGCTGGTTG AAGAGAGCAT GAAGAAGGCC
GACGCGTTGA TAGAGGAGTT CAGAAGCGGG CGGCTGGAGG CCATGCCTGG ATTCACAGTG
GAGGAGACCT TTGAGAACAA GATCACCGAA ATTCTCTCGA AGGTCCGCGA AGACGCCGCT
GTTGTAGTTG AAAAATACAT TAGCAAGAAC ACAGAGGGCT ACCTCATGGC TAAGACGGGG
GCGAGAGGTA GCATCGTCAA CATAGTCCAG ATGGTGGCTA CCCTGGGCCA ACAGACCATC
AGAGGAGAGA GGATCAGACG CGGCTATAGG ACTAGGACGC TGCCCCACTT TCCGCCGGGC
GACATAGGTC CACACGCGGG GGGTTTTGTA GGGCGGTGTT TTAGATGTGG GTTGACTCCT
GTGGAGTATT TCTTCCACGC GGCTGCCGGC AGAGACGGTT TGATAGACAC GGCAGTTCGT
ACGGCGCAGT CCGGCTATAT GCAGAGGAGG CTCATCAACG CTCTGCAAGA CGTGTACGTA
GCCTACGACG GCACCGTTAG ATTCAGCGGA GCTAACTTGC TCCAGATGCT CTACGGCGAA
GACGGCGTCG ACGTAAGCCG TTCGGATCAC GGGAAAGTCG CAGATATAAA GTCCCTAAAG
CTCTGGATAA GATGA
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| Protein sequence | MSLRGELDTI PRKAIKSIKF GILSPEMIRK YSVMEVTTSE VYDEGGLPVR GGIADRRLGV
AEPGARCETC GQTHDVCPGH FGHVELVKPV IHVEYARIIY DVLRTTCPNC GRIMLKDEEI
QRYRERLTKL KSKWRLLAMN LHEKIRKKAS ERMTCPHCGY KRNKVRFERP YYFYEETEEG
ALVKLDPEVL RDRLAKVPNE DLELLGLNPS VARPEWAILK VLPVPPPHVR PSIQLETGIR
SEDDLTHKLV DIIRMNEKLK IAIETGAPTN VVDNLWDLLQ YHVATYFDNE LPGIPVAKHR
GGRPLKGIAQ RLKGKEGRFR GSLSGKRVNF SARTVISPDP HISINEVGVP YDIAKILTVP
ERVTEWNVDV LREYVMRGPE TWPGANYVIT PEGRRIDLRY VKDKRALAER LAPGWIVERH
LVDGDIVLFN RQPSLHRVSI MGHIVKVLPG RTFRLHLAVC PPYNADFDGD EMNLHVPQTE
EARAEARTLM LVEKHIITPR YGGAIIGARQ DYIIGAYLLS QKSTFLTKKE LAYLLGAGKS
TEDPPEPAFL HPVELWTGKQ VISHFLPKDL NWVQPTAFKS KCQDAYRCAG DEWIIIINGV
MVKGVLDKKS IGAEQVDSLW HRIARDYPPE VARRWLDSSL RLFLRYLDLR GFTFGIDSVY
LPPEAYGEID ALVEESMKKA DALIEEFRSG RLEAMPGFTV EETFENKITE ILSKVREDAA
VVVEKYISKN TEGYLMAKTG ARGSIVNIVQ MVATLGQQTI RGERIRRGYR TRTLPHFPPG
DIGPHAGGFV GRCFRCGLTP VEYFFHAAAG RDGLIDTAVR TAQSGYMQRR LINALQDVYV
AYDGTVRFSG ANLLQMLYGE DGVDVSRSDH GKVADIKSLK LWIR
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