| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1944 |
|---|
| Symbol | |
|---|
| ID | 6166313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 1713031 |
|---|
| End bp | 1713909 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641669107 |
|---|
| Product | alpha-L-glutamate ligase |
|---|
| Protein accession | YP_001795305 |
|---|
| Protein GI | 171186386 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
|---|
| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.123222 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTCG CCATCGTGGC TGAGTCGCAA ACCCCCGACG AGCCGACAAG GGATATATAT
TTCGAGGTAA AGAGGAGGGG TCTCTCGGTG CGGTACATAC CTATACAGAG GCTCTCCGTC
AAAATCGCCG GGGGGGCGGC TACTGTGGAA AGCAGGAGAG GCCGCGTCGA CGCGTCGGTG
GTCGTAGTCA GGGGGCTGGG CTACGTCATA GATTCCAACA CCCTCATGAG GAGGGTTGCG
GCTTTGAAGA TACTGGAGAG GGAGGGGGCC GTCGCCATAA ACCCCGTGGA TGCTCTGTTG
AGCTCCAGGA ACAAGCTGGA GACCATATAT GTTTTGAGCA AAGCCGGCAT ACCGGTGCCC
CCCACCGTCG CCACGGAGGA CCTCTACTAC GGCTACGTCT CCGTCAAAGA CCTGGGCAAG
GTGGTGGTGA AGCCGATACA GGGTAGCCGG GGCTACGGCG CTATGATGTT TGAAGACCCC
GAGCAGGCCT TCCAGGTCAT GCGGACGCTC CTCATCGCCA AGAACCCGCT ATATATCCAG
AAGTATGTGG AGAAGCCGAA TAGGGATATC AGAGTAATCG TGGTAGACGG GCGGCCTATA
GGATGTATGT ACAGGATATC CAACAGCTGG AAGACCAACA TAGCCCAGGG GGCCGTGGGG
GCGCCCTGCA AGACCACGCC GGAGCTTGAG GAAATCGCCG TGAAGGCCAC GGAGGCGCTG
GGGCTGGTGT ACTCCGGCGT TGACATAGGC GAGGGGGCGG AGGGCTACGT GGTTTTTGAG
GTAAACGCGA GCCCCGACTG GAGGGGGTTT AAGCAGGCCA CCGGGATAAA CCCCGCCGTC
CACCTGGCGG ATTACATACA GAGGGCCGTC AGGAAATAA
|
|---|
| Protein sequence | MDVAIVAESQ TPDEPTRDIY FEVKRRGLSV RYIPIQRLSV KIAGGAATVE SRRGRVDASV
VVVRGLGYVI DSNTLMRRVA ALKILEREGA VAINPVDALL SSRNKLETIY VLSKAGIPVP
PTVATEDLYY GYVSVKDLGK VVVKPIQGSR GYGAMMFEDP EQAFQVMRTL LIAKNPLYIQ
KYVEKPNRDI RVIVVDGRPI GCMYRISNSW KTNIAQGAVG APCKTTPELE EIAVKATEAL
GLVYSGVDIG EGAEGYVVFE VNASPDWRGF KQATGINPAV HLADYIQRAV RK
|
|---|
| |