Gene Tneu_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1901 
Symbol 
ID6164887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1673490 
End bp1674596 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content63% 
IMG OID641669064 
Productradical SAM domain-containing protein 
Protein accessionYP_001795262 
Protein GI171186343 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.13165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGGGA TTAGGGAGCT AATCGAGAGG TTCCACAGCG CCCCCCTCAT CGTGTTTTGG 
GAATCCACCA AGGCCTGCCC CCTCGCCTGT AAACACTGTA GGGCAGACGC AATACTGAGG
CCGCTACCCG GGGAGTTGAA CACGGAGGAG GGCAAGAGGC TCATAGAGCA GGTGGCCTCC
TTCGGCGACC CCAAGCCGCT TCTGGTGATC ACCGGCGGCG ACCCCCTCAT GAGGAACGAC
CTCTTCGACC TCGTGGACTA CGCCGTCCAG CTGGGGGTCC CCACGTCGCT TGCGCCTGCG
GTTTCGCCGA ACCTCAGCCC AGAGACGCTC AAGGCCATAA GGGAGCACGG CGTCAAGGCC
ATCTCCATAA GTCTAGACGG GGCGAGGGAG GAGACACACG ACGAGATCCG GGGGGTCCCG
GGGAGCTTCC GCAACACCCT GGCGGCTATC AAGGCGGCGG TAGACGCGGG GGTTCAGGTC
CAGGTAAACA CCGTCGTGTG GAGGAAATCC CTCCCCGAGC TCCCCGAGGT GGTTAAGCTC
ATCACCGACC TGGGGGTCAA GACGTGGGAG GTCTTCTTCC TCATAGTGAC GGGGAGGGCG
AGGGAGGAGC TGGACATCTC GCCTGAGGAG TACGAAGCCG CTGTGCAGTT CCTGGTGGAC
GTCTCCACAT ACGGCATCCA GGTGAGGACG GTGGAGGCGC CGTTCTACAG GAGGGCGAAG
CTGGAGAGGC TGGAGGGCAA GACCTACGAC AGCCCGCTGT ATAGAAAGCT AGTGGAGCGG
CTGGGCGAAC TGATGGGCCC GCCTAGGAGG GGGGTCGACC CCACCGTGGT GCCCACCCGC
GACGGCTTCG GCATAATCTT CGTGGCCTAC GACGGCACCG TGTACCCAAG CGGCTTTCTG
CCATACCCCC TGGGAAACGT CAGAAGACGG AGTCTGGTGG AGATATACAG GGATCACCCG
CTACTCCAGA AGATGAGACG CGGCGAATTC GGCGGGAGGT GCGGAGTGTG TAAGTACAAG
GACATATGCG GCGGCTCCAG GGCAAGGGCC TTCGCCTACT TCAAAGACCC GCTGGCGGAG
GACCCGGCAT GCGTCTACAA GCCATAG
 
Protein sequence
MRGIRELIER FHSAPLIVFW ESTKACPLAC KHCRADAILR PLPGELNTEE GKRLIEQVAS 
FGDPKPLLVI TGGDPLMRND LFDLVDYAVQ LGVPTSLAPA VSPNLSPETL KAIREHGVKA
ISISLDGARE ETHDEIRGVP GSFRNTLAAI KAAVDAGVQV QVNTVVWRKS LPELPEVVKL
ITDLGVKTWE VFFLIVTGRA REELDISPEE YEAAVQFLVD VSTYGIQVRT VEAPFYRRAK
LERLEGKTYD SPLYRKLVER LGELMGPPRR GVDPTVVPTR DGFGIIFVAY DGTVYPSGFL
PYPLGNVRRR SLVEIYRDHP LLQKMRRGEF GGRCGVCKYK DICGGSRARA FAYFKDPLAE
DPACVYKP