Gene Tneu_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1893 
Symbol 
ID6164850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1667722 
End bp1668384 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID641669056 
Producthypothetical protein 
Protein accessionYP_001795254 
Protein GI171186335 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.100448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGCCA TACTTCAGGC GTGGGCGTAC GGGGTGGCGC TGTATCTAAT CTACCTGACG 
CTTATTAGGC TGTGGAGAGA GAGGATAGAC GCGGTGCTTG TAGGCCTCTT CTTCGGCACG
CTTACGGCGG CGCAGTTTAT CGCCAACAAG CTTGTGGACT ACGGCATTGG CGTGGCCCCC
GCCGGCACCG TCATCTTCAT GACTAACGTC GCCGTGTTGG ACGCCATGGC GCTGTTCTTC
GGCAGGGGGT TCGCCATGAG GGCCGTGAGG CTCGGCTTCT TCTTCCAGGC GGCGGTGGCC
TTCGCCGCCT GGGCCGCCGC ACAGCTACCC CCGCCGGCGT GGTTCGCCGA GAGAGCCGCC
GTGGTGGACT CGGTAATTGC CCCCTCCGCC AGGATTGCGC TTGCCTCCCT CGCCGCCTAC
CTCATATCCT CCACCGTGGA CGTCTACATC GTCACCAAGT GGCCCCGCCT CCACATACTC
GCCAGGGTCT ACAGCTCCTC CTTCGTGGCG ATGGCGGTGG ACACCCTGGT CTTCATCTCG
CTGGCCTTCG GCCCCGAGGC GCAGATCATA GTGGGCCAGA TACTTGTCAA GTGGGCCCAA
GTCCCGCTTG AGGCGCTTCT CATCTACGGG GCGAGGAGGT ACGTCGCGTC GCTTAAGGCG
TAA
 
Protein sequence
MFAILQAWAY GVALYLIYLT LIRLWRERID AVLVGLFFGT LTAAQFIANK LVDYGIGVAP 
AGTVIFMTNV AVLDAMALFF GRGFAMRAVR LGFFFQAAVA FAAWAAAQLP PPAWFAERAA
VVDSVIAPSA RIALASLAAY LISSTVDVYI VTKWPRLHIL ARVYSSSFVA MAVDTLVFIS
LAFGPEAQII VGQILVKWAQ VPLEALLIYG ARRYVASLKA