Gene Tneu_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1876 
Symbol 
ID6164930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1653638 
End bp1654693 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content67% 
IMG OID641669038 
Producthypothetical protein 
Protein accessionYP_001795237 
Protein GI171186318 
COG category[R] General function prediction only 
COG ID[COG4756] Predicted cation transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0430501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.425301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTGG TTTTACAGGT GGTGTTTCTC GTCTTGCTTG TGGCTCTTCC CCTGGCCTCT 
AGGCGGGTGG AGCACAACCT CGAGCTGTTT TTCCTGGGGG TCGGCGTCGT GGCGGCGTCT
GTTGGGGGGA TCTGGAGCCT GCACCTTCTT GAGGAGGCTC TTCTCCACCC CGTGGCTGTC
TACCAGCCGG GGGTCGGCTA CGTGCCGGTG GGCATCACGC AGGTTGTTCT TCTGGCCGGG
CTGGCCTTCT ACCTCTTGAG GCGGAGGCTG GCGGCTTGGG CCGGCGCTCT GGCTAGGCCT
GGGGTGCTGG CTGCTTTGGT CCTGGCGCTG GGGCTCTCCA GTAGCGTGGT GTCTGCGGTT
GTGGCGGCGG CGGTGCTGGC GGAGCTTCTG GCGTTTGCAA GGGCGCCGCA TGGCTACAAG
GCGGTTGCGG CTGTGTCCGG CGCATACGCC ATTGGCGCCG GCGCGGCTCT ACTGCCGCTG
GGCGAGCCGC TGTCGGCCAT TGCAGTGGCT AAGCTGAGGC AGGGCTTTTT CTACCTCGTG
GATGTCCTCC TCGACGTGGT CCTCATCTTG GTGGTCTTCT TCGCCCTGTA CACCTACTTC
GCGCTGGCGA GGCGGAGGGG CGCCGGGGCG GAGGTGGAGC CGTATGAGCC GGAGCTTAGG
GAGGTCTTCG CCAGGGCGGC TAGGGTGTAC GTCTTCATCT TCGCCCTGAC CATACTGGGC
GAGTTTTTCA AGCCGCTCGC CGCCGCCGTC TCCGGACTCG GCAGAGAGGC CCTCTACCTC
TTCGGCGCGG TCTCCGCCGT GGCGGACAAC GCCACCCTCG TCGCAACTCT GGTGGGCCCC
GAGATGGCCC CGGAGGCGCT CCGGAGCTTC CTAACGTCGC TCCTCATCGC AGGCGGCTTC
ACGGTGCCCG GCAACGTGCC CAACATCGTG CTGGCGGGCG CCCTAAAGAT CGGCTTTAGG
GAGTGGCTGA GGCTGGCCCT CCCCGTCGGC ATCCCCGTGT TTACAGCCGC AGGGCTCTAC
ACCCTGGCCC TCCTCCCACG CCCGCCGCTG TTGTAG
 
Protein sequence
MELVLQVVFL VLLVALPLAS RRVEHNLELF FLGVGVVAAS VGGIWSLHLL EEALLHPVAV 
YQPGVGYVPV GITQVVLLAG LAFYLLRRRL AAWAGALARP GVLAALVLAL GLSSSVVSAV
VAAAVLAELL AFARAPHGYK AVAAVSGAYA IGAGAALLPL GEPLSAIAVA KLRQGFFYLV
DVLLDVVLIL VVFFALYTYF ALARRRGAGA EVEPYEPELR EVFARAARVY VFIFALTILG
EFFKPLAAAV SGLGREALYL FGAVSAVADN ATLVATLVGP EMAPEALRSF LTSLLIAGGF
TVPGNVPNIV LAGALKIGFR EWLRLALPVG IPVFTAAGLY TLALLPRPPL L