Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1830 |
Symbol | |
ID | 6164736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 1610797 |
End bp | 1611339 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641668993 |
Product | hypothetical protein |
Protein accession | YP_001795193 |
Protein GI | 171186274 |
COG category | [S] Function unknown |
COG ID | [COG3371] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.483893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGGATAT GTAGAGCCTT TCTCGCAGTA GGCGTGCTTC AGTTCATGTC GGCTGTCCTA GTAGCCGAGC GTTTGTATCC CGGCTACAGC CCCTCTACTC ACTACATCAG CGACTTAGGC GCTGCGGCGG CCCCCACCGC CGCTCTTTTT AACATAAGCG CCGCGGCGCT GGGCATAGCA GGCGTTGCCG CCGCGTTTTG CCTAAGGAGG GCTCATCCAA GGGGGTGGCC TCTGCTGGCC TCAGCCTCGG TGGGGGTCGT GGGGGTGGCC CTCTTCCCAG AGGACGCCGG GCTCCCCCAT TTCATATCTG CCTTCACGGC GTTTATCTGC GGCGCAGCCT CAACGGCTGT GATCGGCGCC GAGGCAGGAG GCGTCTACAG AACGCTCGGC GTTAGTCTCG CCGCTTTGTC CACAGCCGCC TTGTCGTTGA TGGCGGCAGG CCTGGAGACC CCGCTCGGCG CCGGGTGTCT AGAGAGGCTG GTGGCCTACC CAATACTTAT ATTCTACATG GCTTACGGCT TCGGTGGTGA AGAAACTGGT TAG
|
Protein sequence | MRICRAFLAV GVLQFMSAVL VAERLYPGYS PSTHYISDLG AAAAPTAALF NISAAALGIA GVAAAFCLRR AHPRGWPLLA SASVGVVGVA LFPEDAGLPH FISAFTAFIC GAASTAVIGA EAGGVYRTLG VSLAALSTAA LSLMAAGLET PLGAGCLERL VAYPILIFYM AYGFGGEETG
|
| |