Gene Tneu_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1813 
Symbol 
ID6164505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1592787 
End bp1593440 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content63% 
IMG OID641668976 
Producthypothetical protein 
Protein accessionYP_001795176 
Protein GI171186257 
COG category[S] Function unknown 
COG ID[COG1590] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.212235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.678735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGCCG TAGATAGGAG GGTTTTTGAG GCCCGAAAGC GCGTGTTCGT AGAGCGGCTC 
GAGAGAGAGG CCCTCCAGGA GAGGGTAGAC GGCGATATCC TCCCCCTCCT CCGCCTCCTG
AACCGGCACC CTGCCATATA CACTACTTCC AGCTGTAGCG GGAGGATAAT GGTGGCAGAG
GCGGTGAGGC CGAGCTACAG CAAGGGCAGG GGGTTCAGGC CGGTGGCTAA GTGGCACCAC
CCGGCGCCGC CCGACCTGGT GAGGGCGGCC GCCGACCAGG TGGACAATGC GTGGCTAATG
GTGAGGGGGG CGATTCTACA TCTGGCGGCC GCAGACGCCA AGACGGCATA CCGGCTGGTT
GAGGTGGGTA GGGAGACGGG GCATAAACAC AGCGGCATAA TCGCGATAAA CAGAGGCGGC
ATCTTCGTCG AGATACTGGG CGAGGAGCGG CTGGACATAC CGCTGAAGAG AGGCGGCATC
TACGTCTCAG ATCTAGAGAC GGCGGTGGAC ATGGCAAACA AAACCCTGGT GCTGGCGAAG
CTGAGGCTGT ACTGGCTGGC GGCCCGCCTA GAGGCGGAGC TCTTCGGCCT AGAGACGCCG
GAGAGCGACG AGATCAGGAG AGCCATCCGC CGGGCGGCAA ACTGCCTCGG ATAA
 
Protein sequence
MGAVDRRVFE ARKRVFVERL EREALQERVD GDILPLLRLL NRHPAIYTTS SCSGRIMVAE 
AVRPSYSKGR GFRPVAKWHH PAPPDLVRAA ADQVDNAWLM VRGAILHLAA ADAKTAYRLV
EVGRETGHKH SGIIAINRGG IFVEILGEER LDIPLKRGGI YVSDLETAVD MANKTLVLAK
LRLYWLAARL EAELFGLETP ESDEIRRAIR RAANCLG