Gene Tneu_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1811 
SymbolubiA 
ID6164385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1590977 
End bp1591813 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content62% 
IMG OID641668974 
Productprotoheme IX farnesyltransferase 
Protein accessionYP_001795174 
Protein GI171186255 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) 
TIGRFAM ID[TIGR01473] protoheme IX farnesyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.632186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.509325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCT ATATCGTTTT GCTGAAGCCC CGGGTCATCT GGCTTTTGAT CCTATCCAGC 
GTCGTGGGGT ACGTATACGC CGCGGGGACG GTGGACTGGG GTCGGCTTGC GGCACTGACA
GCCGCCGCCA CGCTCGCGGT GGGGGGCTCC GCCGCCTTCA ACCACTACTG GGAGCGGGAT
ATAGACGCCG CTATGGCGCG AACCGCGAGG AGACCTCTGC CGGCGGGGGC GATACCGCCT
TCAAACGCCC TTGTCTACTC CCTAGCCCTC TCCGCCACCG GCATACTGCT GGGCTTCTAC
CTCCTGGGCC CTCTCCCCGG CGTATTCGTC GCTCTGGGCT GGTTCTTCTA CGCCGTCGTC
TACACCGTCT GGCTAAAGAG GAGGACTTGG CTGAACATAC TGGGCGGGGG CTTTGCGGGT
AACGCCACCT TCCTCGGCGG CTACGCCCTG GGGAAGGGGA CGGTGGATCT TCCGGCCGTC
CTCATCTCCT TCGCCATATA CCTCTGGATA CCCTCCCACA TATGGGCGCT GGCGTATAAA
TACAGAGAGG ACTACAGAAG GGCTGGCGTC CCCATGTTGC CCGCCATTAT AGACGAGGGG
AAGGCCGTGG CTATAATCTC GGCGCTGAAT ATAGCAAGCG CCGCCTACAT CCTCTGGCTC
TATCTGGTCT TCGGCCGCGG ACTCCCCGGC CTCGCCCTGG TTCTCGCGGG GGTGGCCGGC
ACGGTGGCAA CCAGCGCCCT AGCGCTCAGG GAAAAAAGCG ACAGAGCCAT GTGGAGGATG
TACAAGGCCT CCAGCCCCAT CCTTACCCTC TTTCTGCTCG CTCTGGTGTT TTCGTAG
 
Protein sequence
MNPYIVLLKP RVIWLLILSS VVGYVYAAGT VDWGRLAALT AAATLAVGGS AAFNHYWERD 
IDAAMARTAR RPLPAGAIPP SNALVYSLAL SATGILLGFY LLGPLPGVFV ALGWFFYAVV
YTVWLKRRTW LNILGGGFAG NATFLGGYAL GKGTVDLPAV LISFAIYLWI PSHIWALAYK
YREDYRRAGV PMLPAIIDEG KAVAIISALN IASAAYILWL YLVFGRGLPG LALVLAGVAG
TVATSALALR EKSDRAMWRM YKASSPILTL FLLALVFS