Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1811 |
Symbol | ubiA |
ID | 6164385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 1590977 |
End bp | 1591813 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641668974 |
Product | protoheme IX farnesyltransferase |
Protein accession | YP_001795174 |
Protein GI | 171186255 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.632186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.509325 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCCCT ATATCGTTTT GCTGAAGCCC CGGGTCATCT GGCTTTTGAT CCTATCCAGC GTCGTGGGGT ACGTATACGC CGCGGGGACG GTGGACTGGG GTCGGCTTGC GGCACTGACA GCCGCCGCCA CGCTCGCGGT GGGGGGCTCC GCCGCCTTCA ACCACTACTG GGAGCGGGAT ATAGACGCCG CTATGGCGCG AACCGCGAGG AGACCTCTGC CGGCGGGGGC GATACCGCCT TCAAACGCCC TTGTCTACTC CCTAGCCCTC TCCGCCACCG GCATACTGCT GGGCTTCTAC CTCCTGGGCC CTCTCCCCGG CGTATTCGTC GCTCTGGGCT GGTTCTTCTA CGCCGTCGTC TACACCGTCT GGCTAAAGAG GAGGACTTGG CTGAACATAC TGGGCGGGGG CTTTGCGGGT AACGCCACCT TCCTCGGCGG CTACGCCCTG GGGAAGGGGA CGGTGGATCT TCCGGCCGTC CTCATCTCCT TCGCCATATA CCTCTGGATA CCCTCCCACA TATGGGCGCT GGCGTATAAA TACAGAGAGG ACTACAGAAG GGCTGGCGTC CCCATGTTGC CCGCCATTAT AGACGAGGGG AAGGCCGTGG CTATAATCTC GGCGCTGAAT ATAGCAAGCG CCGCCTACAT CCTCTGGCTC TATCTGGTCT TCGGCCGCGG ACTCCCCGGC CTCGCCCTGG TTCTCGCGGG GGTGGCCGGC ACGGTGGCAA CCAGCGCCCT AGCGCTCAGG GAAAAAAGCG ACAGAGCCAT GTGGAGGATG TACAAGGCCT CCAGCCCCAT CCTTACCCTC TTTCTGCTCG CTCTGGTGTT TTCGTAG
|
Protein sequence | MNPYIVLLKP RVIWLLILSS VVGYVYAAGT VDWGRLAALT AAATLAVGGS AAFNHYWERD IDAAMARTAR RPLPAGAIPP SNALVYSLAL SATGILLGFY LLGPLPGVFV ALGWFFYAVV YTVWLKRRTW LNILGGGFAG NATFLGGYAL GKGTVDLPAV LISFAIYLWI PSHIWALAYK YREDYRRAGV PMLPAIIDEG KAVAIISALN IASAAYILWL YLVFGRGLPG LALVLAGVAG TVATSALALR EKSDRAMWRM YKASSPILTL FLLALVFS
|
| |