Gene Tneu_1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1803 
Symbol 
ID6164567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1582414 
End bp1583523 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content61% 
IMG OID641668967 
Productinner-membrane translocator 
Protein accessionYP_001795167 
Protein GI171186248 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.68636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCTC TGGCCCTAGT CGGCCTCTAC GTCTACGGGC TCTCGGTAGC GGCCGTAGCG 
CTGTCGGGAC TAGACGTAGT CTCGTACATC CTCGGCACCA TCGTCGACGT GGCTATATTC
GCCATAATCG CCCTGTCTAT AAACCTCGAG GCGGGGGTGG GCGGCATACC GAACTTCGGA
AAGGTGCTCA CCGTTACAGC CGGCGCCTTC ATAGTCGGCG GCGTGGTGTC TAGGTTAGCC
ATGTCGATCT ACGGCGTCAG CGGGGATTTC GTCTACGACA ACCCCACGAT AGTGTCAAAC
CTGGCGAAGG CCATGGACCC CCAAGGCGCC CTACTGCTGC TAGCCCTCTC TCTCCTGTTT
TCGCTCGCCG CAGGTGCCGC CATAGGCGTA GCCATGTCTC TACCCGCCGT GAGGCTTAGG
GAGGACTACT TAGCCATCAC CCTGCTGGCC TTTGGAGACG TCCTCTTCTA TGTCGGCAGA
TACTACGAGC CCTTCGTCGG GGGGACATTC GGGGTTTCTA TACCGCCGAT ACTGGAAAAG
GTGTTCGGAG GCGGCTTCTC CAGATACTTA GGTGCGGCGG TGTTAGCCGG GGCGGTAGCT
CTCGCGGTCT ACCTTGTGCT GGATAGGTTG GTGAACTCGC CATACGGCAG AGCCCTTAGG
GTCCACCGGG AGGACCCCGA GCTCGTGGAG GTGTTCGGCC GCAGAGCCAC GGCGCTGAGG
CTCTGGGCCA TGGCGGTAGG CGGCGCAGTT TCAGCGACGG CGGGCGCTCT ATATGCCCTC
TACGCCGGGG CGGTACACGC CAGCTCCTTC ACCAGGATCA CGTTCACGTT CTACCCCTGG
CTCATAATGA TCCTAGGGGG GATGGGCAAC AATCTGGGGG TTGTCAACGG CGTCTTTATC
TTTGTCACAC TGCGCCGGCT GATAGACATG TACAAATACG AGCTATCCTC TATACTGGGC
TTTGACCCAG TCTGGTTGGC CTACATGTTG TTCGGCGCCC TGGCCCTGGC GATTATCGCC
GCCAAGCCGG AGGGTCTGAT CCCGGAGGAG CAGACCCCGC TCGCAAAGAG GAGGAAGATC
CAGAGGAGTG GTGCGGCCGC CGGGATTTGA
 
Protein sequence
MRPLALVGLY VYGLSVAAVA LSGLDVVSYI LGTIVDVAIF AIIALSINLE AGVGGIPNFG 
KVLTVTAGAF IVGGVVSRLA MSIYGVSGDF VYDNPTIVSN LAKAMDPQGA LLLLALSLLF
SLAAGAAIGV AMSLPAVRLR EDYLAITLLA FGDVLFYVGR YYEPFVGGTF GVSIPPILEK
VFGGGFSRYL GAAVLAGAVA LAVYLVLDRL VNSPYGRALR VHREDPELVE VFGRRATALR
LWAMAVGGAV SATAGALYAL YAGAVHASSF TRITFTFYPW LIMILGGMGN NLGVVNGVFI
FVTLRRLIDM YKYELSSILG FDPVWLAYML FGALALAIIA AKPEGLIPEE QTPLAKRRKI
QRSGAAAGI