Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1803 |
Symbol | |
ID | 6164567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 1582414 |
End bp | 1583523 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641668967 |
Product | inner-membrane translocator |
Protein accession | YP_001795167 |
Protein GI | 171186248 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.68636 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGACCTC TGGCCCTAGT CGGCCTCTAC GTCTACGGGC TCTCGGTAGC GGCCGTAGCG CTGTCGGGAC TAGACGTAGT CTCGTACATC CTCGGCACCA TCGTCGACGT GGCTATATTC GCCATAATCG CCCTGTCTAT AAACCTCGAG GCGGGGGTGG GCGGCATACC GAACTTCGGA AAGGTGCTCA CCGTTACAGC CGGCGCCTTC ATAGTCGGCG GCGTGGTGTC TAGGTTAGCC ATGTCGATCT ACGGCGTCAG CGGGGATTTC GTCTACGACA ACCCCACGAT AGTGTCAAAC CTGGCGAAGG CCATGGACCC CCAAGGCGCC CTACTGCTGC TAGCCCTCTC TCTCCTGTTT TCGCTCGCCG CAGGTGCCGC CATAGGCGTA GCCATGTCTC TACCCGCCGT GAGGCTTAGG GAGGACTACT TAGCCATCAC CCTGCTGGCC TTTGGAGACG TCCTCTTCTA TGTCGGCAGA TACTACGAGC CCTTCGTCGG GGGGACATTC GGGGTTTCTA TACCGCCGAT ACTGGAAAAG GTGTTCGGAG GCGGCTTCTC CAGATACTTA GGTGCGGCGG TGTTAGCCGG GGCGGTAGCT CTCGCGGTCT ACCTTGTGCT GGATAGGTTG GTGAACTCGC CATACGGCAG AGCCCTTAGG GTCCACCGGG AGGACCCCGA GCTCGTGGAG GTGTTCGGCC GCAGAGCCAC GGCGCTGAGG CTCTGGGCCA TGGCGGTAGG CGGCGCAGTT TCAGCGACGG CGGGCGCTCT ATATGCCCTC TACGCCGGGG CGGTACACGC CAGCTCCTTC ACCAGGATCA CGTTCACGTT CTACCCCTGG CTCATAATGA TCCTAGGGGG GATGGGCAAC AATCTGGGGG TTGTCAACGG CGTCTTTATC TTTGTCACAC TGCGCCGGCT GATAGACATG TACAAATACG AGCTATCCTC TATACTGGGC TTTGACCCAG TCTGGTTGGC CTACATGTTG TTCGGCGCCC TGGCCCTGGC GATTATCGCC GCCAAGCCGG AGGGTCTGAT CCCGGAGGAG CAGACCCCGC TCGCAAAGAG GAGGAAGATC CAGAGGAGTG GTGCGGCCGC CGGGATTTGA
|
Protein sequence | MRPLALVGLY VYGLSVAAVA LSGLDVVSYI LGTIVDVAIF AIIALSINLE AGVGGIPNFG KVLTVTAGAF IVGGVVSRLA MSIYGVSGDF VYDNPTIVSN LAKAMDPQGA LLLLALSLLF SLAAGAAIGV AMSLPAVRLR EDYLAITLLA FGDVLFYVGR YYEPFVGGTF GVSIPPILEK VFGGGFSRYL GAAVLAGAVA LAVYLVLDRL VNSPYGRALR VHREDPELVE VFGRRATALR LWAMAVGGAV SATAGALYAL YAGAVHASSF TRITFTFYPW LIMILGGMGN NLGVVNGVFI FVTLRRLIDM YKYELSSILG FDPVWLAYML FGALALAIIA AKPEGLIPEE QTPLAKRRKI QRSGAAAGI
|
| |