Gene Tneu_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1800 
Symbol 
ID6164410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1580260 
End bp1581549 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content62% 
IMG OID641668963 
ProductNADH/ubiquinone/plastoquinone (complex I) 
Protein accessionYP_001795164 
Protein GI171186245 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.916161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAGCG AGGTGTTTAT ACTGGCCACC GCGCTGTCCG CCGCCCTGGC GCTGGCGGCG 
CTTAGGCTTG GCTACCCGGC CGCCCTCGCC TCCATAGCCT CCATGTTGCT GTTCCTAGCC
CCCGGCTCCG CCGTCTTGGT GACCCTCCCC TACGTGGGGG AGGTGGCCGT GGCCATGGAC
GGGCACAAGC TACCCTTTGT GGCGGCCTCG GTTCTGTTGG GCCTAATAGT CACCTTCTAC
GCGCCTCGGT ATCTAAAACA TCTAGGCGCC CCCAACTGGT ACTACGGCGT CCACGCCCTC
TACGTCCTCT CCTTCGTCTA CATCGTGTTG TTTGAAAACC TCTTCTTCGT CTTCCTGGCG
CTGGAGCTCA GCATTGTGAC GAGCTTCCTC CTCATATGGT ACTTCGGGTA CGGCAATAGA
AGGTTCGTGG GGCTTCTCTA CTTCGTCTGG GCCCAGATTG GGTCGATACT CTTCTTAATA
GGGGTCGCCC TCACCGGCAG GTTTACCGCC AGCGGCTTCG AGACGGCTCG CCTAGCTTTC
GACTTAGCCA CCTTCCTCGT GTTGCTAGGC CTTCTGGTGA AGATGGGCAC GGCGGGGGTC
CACTTCTGGC TACCCTATGC ACACGCCGAG GCGCCTACTC CCCTCAGCGC GCTCTTGTCG
CCTATACACG TGGGCCTCAT GTCCTACTGG ATATGGCGTC TCAAAACCGG CGCAGGTTGG
CCGCTGGAGG CCCTGTTTCT ATACGGGCTG GCCACCGCCG TCTACGGCTC CCTGCTTGTG
TTTAGGGAGA CAGACTTCAA ACGCGCACTG GCGGACTCGA CAGTTGCCAA CATGGGTCTT
CTGTTGGCGG CGGCCTCCAT CCCGAGGGAC TTCAGCTATA CAGCTACCGC GCTCCTCTTC
GTGGGCCACG CCTTCGCCAA GGCGGCTCTC TTCATGTTGG CAGGCATCTA CATCGTCTCG
TTGCACACAA GGGAGATAGG CGCCGCTAGG TGGGACCGAC ACCTCCTGGC CGTCGGGATT
CTCGGCTTCG TGGCGCTGGC CGGCCTCTTC GGCATAAACC TCCTGGGCAA GGCATACGTC
GCCGCGGGAG TGCCCGCCAC CTTGTCGGCG GCAGCGCTGG CCGTCTTCGC GCTTCTCTCC
ACCGCGGTCT ACAGCTTCTA CTTGCTTAAC CAGCTGTACA GAGCCGGCGA GGCGCAGGTG
GAGTACCCGC CCGACATGTA CGCCGCCGCT CTGGCGGCGG CCGCCACGCC CTACGTTCTG
CTGGCGGCTT TGCCCCTATG GCTACGCTAG
 
Protein sequence
MYSEVFILAT ALSAALALAA LRLGYPAALA SIASMLLFLA PGSAVLVTLP YVGEVAVAMD 
GHKLPFVAAS VLLGLIVTFY APRYLKHLGA PNWYYGVHAL YVLSFVYIVL FENLFFVFLA
LELSIVTSFL LIWYFGYGNR RFVGLLYFVW AQIGSILFLI GVALTGRFTA SGFETARLAF
DLATFLVLLG LLVKMGTAGV HFWLPYAHAE APTPLSALLS PIHVGLMSYW IWRLKTGAGW
PLEALFLYGL ATAVYGSLLV FRETDFKRAL ADSTVANMGL LLAAASIPRD FSYTATALLF
VGHAFAKAAL FMLAGIYIVS LHTREIGAAR WDRHLLAVGI LGFVALAGLF GINLLGKAYV
AAGVPATLSA AALAVFALLS TAVYSFYLLN QLYRAGEAQV EYPPDMYAAA LAAAATPYVL
LAALPLWLR