Gene Tneu_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1797 
Symbol 
ID6165003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1576545 
End bp1577483 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content60% 
IMG OID641668960 
Productpyruvate ferredoxin oxidoreductase subunit gamma/delta 
Protein accessionYP_001795161 
Protein GI171186242 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
[COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit 
TIGRFAM ID[TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family
[TIGR02179] 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.549394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTTG AGACGATCTG GCTTGGCCGC GGGGGCCAGG GCATCGTCAC GGCCACCTAC 
ATAGTCGCCA ACGCCGCCGT GATAGACGGC TTCTACGCCA TTGCCAACCC TGAGTTCGGC
GCGGAGAGGA GAGGCGCGCC CGTCAAGGCC TTCCTCACGA TAGATAAAAA CCCCATCGAG
GATCAGGAGC CGATTAAGAC TCCCGACGTC GCCATCATAT TCGACGACAA GCTCATCGAC
CCCATGAGGT TCGCCATTGA CGCCGTGAAG CCCGGCGGCT ACGTCATCGT AAACAGCGCT
AAGCAGCCCG AGGAGGTGCG GAAGCTGGTG GGGAGAAACG ACGTCTACGT GGTGGTGCTA
GACGCTGTCG GCATCGCCAT GAAACACGTG GGTCTCCCCG TGCCCAACGG CCCGCTGGCT
GGCGCCTTTT CCAAGGTGAT GGGCTTCCCC AGGCTTGAGT CGATAAAAAC CGCGTTTGAG
AACCAGCTGG GCAAGGCCGT TGAGGAGAAC TTCGCCGCCA CGAAGGAGGC CTACGAGGTG
GCCGTTGTCC TCAAGCCCGA GAAGGTGGAC GCCTCCGCGA AGCCGAAAGG GGTAATATCC
ACCACGTCGG CCTTCCTAAC CGGGCCCTAC GAGCTTGTGG GCTGGCAACA GGTGAATAAA
GGCGGCGCCG TCGGCCCCGG CAGTAGCTTG CCGTATCTCA CAGGCGGCTG GAGGATAGAG
AAGCCCATTA TAGACCACTC CAAGTGTATA ATGTGTAGGA AGTGCTGGCT GTATTGTCCA
GACGACGCCA TAATAGAGGC TTGGAGGGAG GCGCCGGGGC CTAGAGGCCG CGTCTTTAGG
ACCAAGGCCA TCGACTTCGA CTACCAGTAC TGCAAGGGGT GTGGTGTCTG CGCAGAGGTC
TGCCCAACAG GGGCAATACA GATGGTGAGG GAGATATGA
 
Protein sequence
MRVETIWLGR GGQGIVTATY IVANAAVIDG FYAIANPEFG AERRGAPVKA FLTIDKNPIE 
DQEPIKTPDV AIIFDDKLID PMRFAIDAVK PGGYVIVNSA KQPEEVRKLV GRNDVYVVVL
DAVGIAMKHV GLPVPNGPLA GAFSKVMGFP RLESIKTAFE NQLGKAVEEN FAATKEAYEV
AVVLKPEKVD ASAKPKGVIS TTSAFLTGPY ELVGWQQVNK GGAVGPGSSL PYLTGGWRIE
KPIIDHSKCI MCRKCWLYCP DDAIIEAWRE APGPRGRVFR TKAIDFDYQY CKGCGVCAEV
CPTGAIQMVR EI