Gene Tneu_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1778 
Symbol 
ID6165517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1560458 
End bp1561075 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content64% 
IMG OID641668941 
ProductSNARE associated Golgi protein 
Protein accessionYP_001795142 
Protein GI171186223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.847785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTACG GGCTCCTCGG CGTTTTCCTA GCGGTCCTCC TATCCCACTT CATCCCGTTT 
ATCCCCCTGC CGGGGTACAT AGCCACTGTG GCGTATGTGG CGGCGCACGG CGATCTTCCC
CACATAGCCG CCGCGGTTGT GGCCACCGCC CTCGGCGCGG CGTTGGGTAA AGTAGCCGTC
TTCTTATACG GATACGGCAT TGGGAAGGCG GTTATGGGCG AGGAGCTCCA GTACGCCAAG
AGGTTCTTCG ACAGGGTATC TAAGTGGGGG CTGGACCTAG CCGTTTTCAT ATTCGCCGTA
TCTCCCCTCG CGGACGACGT CTTGTACATA CCGCTGGGGG CGGCGGGCTA CAGCCTAAGG
CGGTTCTTCC TCGCCGTGTT TGCCGGCAAG CTGGTGCTGT CGGCGGCCAT AGCCCTCTTC
GCCGACGCCG CGTTGATGGC CGTTGAGAGC TACACGGGGG ATGTGAGACT GGGGGCGGCG
GCGGTGGCGG CGCTCACAGC GGCGGCGACG TTTCTAGTCC TCAGGATAAA GTGGTCGCGG
GTGCTGGCGG CGTATGAAGA CGGCGGGCTT AAAGCCGCCC TCCGGGAGGC GCTCCGCTCA
ATAGCCAGGC GGAAGTGA
 
Protein sequence
MDYGLLGVFL AVLLSHFIPF IPLPGYIATV AYVAAHGDLP HIAAAVVATA LGAALGKVAV 
FLYGYGIGKA VMGEELQYAK RFFDRVSKWG LDLAVFIFAV SPLADDVLYI PLGAAGYSLR
RFFLAVFAGK LVLSAAIALF ADAALMAVES YTGDVRLGAA AVAALTAAAT FLVLRIKWSR
VLAAYEDGGL KAALREALRS IARRK