| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1726 |
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| Symbol | |
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| ID | 6164966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 1519243 |
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| End bp | 1520505 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641668889 |
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| Product | Pre-mRNA processing ribonucleoprotein |
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| Protein accession | YP_001795090 |
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| Protein GI | 171186171 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1498] Protein implicated in ribosomal biogenesis, Nop56p homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0289991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000329724 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGAAAG TTTACATAGC TACGGACGTG CTGGGGTTTT TCGCCGTGGA CGAGGGGGGG
AACCTGGTGG ATAAAGAGCT GTACGAGAGG AGGCCTGAGG CCATCGCCGC CAGGTTGCTG
GAGCTTGAGA AGTCCAACTA CGTCCCTGAG CTTGTCTCTC TGGTGGAGAG GCTGAGGGAC
AGGGGGGCCA AGGTGGTGGT GGAGGACCCG GAGCTGGCGA GGAAGCTGGT CTCGGCCGTA
AAGGGGGCTG AGATCGTTGC CGAGAGCCCG TCGCCCGTCC TCGTGGCGTT TAGGCAGAAC
TTCCCAAGGT ATCTGCAGGC CGTTGGGCTG AGCTGGGAGG ACTACCGCTC CTTCCTGTTT
GAGGTAAGCG ATTTAGTGAC TAGGCTGAAG CTGAGGCAGG CGGTGGAGAA GAGGGATCTC
TTCATAGCGC AGGCCATAAG CACGCTCGAC GACGTCGACA AGATCTTGAA CTTAATCGCC
TCTAGGATTA GGGAGTGGTA CGGTCTCCAC TTCCCCGAGC TGGAGGAGCT GGTTAGAGAC
AACAGGGAGT ACGTGAAGAT AGTCTACCAC ATCGGCCACA GATCCGGCAT CACGGAGGAG
AGCTTGAGGA AGATCGCGGC CGAGATGCCG GAGGAGAGGG TGAAGAGGAT CGTTGAGTCG
GCTAGGAAGA GCATAGGCGC GGAGATGTCC GAGTGGGACC TGGCGCAGCT CAAGTCCTAC
GCGGAGGCCT ACCTGAAGCT CGACGCGTAT AGGGAGAGCC TCGCCAACTA CATCGACGAG
GCTATGAAGG AGGTGGCGCC CAACATAAGG GAGCTTGTGG GGCCGTTGCT GGGGGCTAGG
TTGATCAAGC TGGCCGGCGG GCTCACGAGG ATGGCGTTCC TCCCGGCGTC TACGATACAG
GTCCTCGGGG CTGAGAAAGC ACTCTTTAGG GCTCTGCGCA CGGGGGGCAA GCCGCCTAAA
CACGGCGTGA TATTCCAGTA CCCGGAGATC TTCAGATCGC CTAGGTGGCA GAGGGGCAAG
ATCGCGAGGG CGCTCGCCGC CAAGCTGGCA ATTGCGGCAA AGGCAGACGC CTTCACGGGC
AACTTCATAG CGCCGCGGCT GAAGGAGGAG CTAATGAAGA GGATCCAGGA GATAAAAACG
CTCTATGCCA AGCCTCCCCC CAAGGCTCCG CAGCAGCAGC CCTCCGCCAA GACGCCCCCG
CCGCCTCCTC CGCCTAGGAG GGGAGGAGAG AGGAGGCCGC CTCCGCGGAG GGGCCGCCGT
TGA
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| Protein sequence | MAKVYIATDV LGFFAVDEGG NLVDKELYER RPEAIAARLL ELEKSNYVPE LVSLVERLRD
RGAKVVVEDP ELARKLVSAV KGAEIVAESP SPVLVAFRQN FPRYLQAVGL SWEDYRSFLF
EVSDLVTRLK LRQAVEKRDL FIAQAISTLD DVDKILNLIA SRIREWYGLH FPELEELVRD
NREYVKIVYH IGHRSGITEE SLRKIAAEMP EERVKRIVES ARKSIGAEMS EWDLAQLKSY
AEAYLKLDAY RESLANYIDE AMKEVAPNIR ELVGPLLGAR LIKLAGGLTR MAFLPASTIQ
VLGAEKALFR ALRTGGKPPK HGVIFQYPEI FRSPRWQRGK IARALAAKLA IAAKADAFTG
NFIAPRLKEE LMKRIQEIKT LYAKPPPKAP QQQPSAKTPP PPPPPRRGGE RRPPPRRGRR
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