| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1716 |
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| Symbol | |
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| ID | 6165412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 1509650 |
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| End bp | 1510024 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641668881 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_001795082 |
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| Protein GI | 171186163 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.220452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000724646 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | GTGAAGGAGG TGGTATACAC GGAAAACGCC CCCAAGCCCA TCGGCCCCTA CTCCCAGGCG
GTCAAGGCAG GCAACATGCT CTTCGTATCA GGCCAGATAC CGGTAGACCC AAAGACGGGG
GAGGTGGTGA GAGGCGGAAT AAGAGAGCAG ACCAAACAGG TCATGGAGAA CATAAAAGCC
GTGCTGGAGG CCGCCGGCTA CAACCTGGAG GACGTCGTCA TGGCCTTCGT CTTCCTCGCA
GACCTAAGCA CGTTCCAGGA ATACAACGAG GTCTACAGCC AGTACTTCAA AAAGCCCCCC
GCCCGCGTCA CGGTACAGGC AGCCCGCCTG CCGAAAGACG TATTAATAGA GGTGGCGGTA
ATAGCCGTGA GGTGA
|
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| Protein sequence | MKEVVYTENA PKPIGPYSQA VKAGNMLFVS GQIPVDPKTG EVVRGGIREQ TKQVMENIKA
VLEAAGYNLE DVVMAFVFLA DLSTFQEYNE VYSQYFKKPP ARVTVQAARL PKDVLIEVAV
IAVR
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