Gene Tneu_1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1680 
Symbol 
ID6165214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1477253 
End bp1477729 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content62% 
IMG OID641668845 
Product30S ribosomal protein S19e 
Protein accessionYP_001795048 
Protein GI171186129 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2238] Ribosomal protein S19E (S16A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTTCGG TTAAGGACGT CCCTGCGGAT CTGCTAATTG CAGAGCTGGC TAGGTACATA 
AGGGAGAACG TGCCGCAGGT GAAGCCGCCC GTCTGGGCGC CCTTTGTGAA GACGGGCGCC
AACAAGGAGA GGCCTCCCAT GACGCAGGAC TGGTGGTACG TGAGAGCAGC CTCGCTGATG
AGGAAGCTGT ACCTCTACGG CCCGGTGGGG GTGGGGAGCT TGAGGACGGC CTATGGATAC
AGGGCGAAGA TCGGCGATAA GACGAGGCCC GAGAGGACTA GGAAAGCCGG CGGGGCCATC
ATCAGGAAGC TACTGCAGCA GCTTGAGCAG GCCGGCTTCG TGGCGAAGAC CAAGGGCGGG
AGGGTGTTGA CTCCGGAGGG CAAATCCCTC GTGGATAGGC TCGCGGCGAA GATAGCGAGG
GACCTCGCGA AGGCTAGGCC GGAGCTCGCG AAATACCTAG CTCCCCCCAA GGAGTAA
 
Protein sequence
MTSVKDVPAD LLIAELARYI RENVPQVKPP VWAPFVKTGA NKERPPMTQD WWYVRAASLM 
RKLYLYGPVG VGSLRTAYGY RAKIGDKTRP ERTRKAGGAI IRKLLQQLEQ AGFVAKTKGG
RVLTPEGKSL VDRLAAKIAR DLAKARPELA KYLAPPKE