| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1655 |
|---|
| Symbol | rpl1P |
|---|
| ID | 6165584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 1460683 |
|---|
| End bp | 1461351 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641668818 |
|---|
| Product | 50S ribosomal protein L1P |
|---|
| Protein accession | YP_001795023 |
|---|
| Protein GI | 171186104 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0081] Ribosomal protein L1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG TAATAAACAA GGAGGCTCTG CTCGCGAAGA TAGAGGAGGC GTTGAGGAGG
GGGAAGCCCA GGAGGTTTAG ACAGAGCGTG GAGCTCATCC TGGTGCTGAG AGAGGTGGAC
TTAAGCAAGC CGGAGAACCG TATAAACCTG CTCGTGGAGT TGCCCCATCC GCCGAAGCCC
AACAAGGTGG CGGCGTTTGC ACACGGCGCG TTCGAGGTGC AGGCGAAAAA CGCAGGCGTT
GACGCCGTGA TATCGAGAGA CCAGGTGGAG GGGCTGTCCG GCAACAAGAG GGCAATTAGG
AAGCTGGCCA AGCAGTACGA CTTCTTCATC GCTCCGCCCG ACCTCATGCC GTTGTTGGGC
AGGGTGGTGG GTCCGATATT TGGCCCACGG GGCAAGATGC CGGAGGTGGC TCCGCCCAAC
GTCGACGTTA AATCGCTGGT GGAGAGGCTG AGGCGGTCGG TTAGGGTGAA GCTGAGGAAT
GAGCCTGTTA TCAAGGTGAG GATAGGGGCT GAGGGCCAGA AGCCCGAGGA GGTTCTGGAG
AACGCCCTAG CCGTCCTGGA GGATGTCAAC AGGAAGTTCT CCCTTAGGCA GTACCTCAAG
GACGTCTATA TAAAGAAGAC GATGGGGCCT CCCGTCAAGG CCAAGGCGCT TGAGGTTTTA
GCGCGTTAA
|
|---|
| Protein sequence | MSAVINKEAL LAKIEEALRR GKPRRFRQSV ELILVLREVD LSKPENRINL LVELPHPPKP
NKVAAFAHGA FEVQAKNAGV DAVISRDQVE GLSGNKRAIR KLAKQYDFFI APPDLMPLLG
RVVGPIFGPR GKMPEVAPPN VDVKSLVERL RRSVRVKLRN EPVIKVRIGA EGQKPEEVLE
NALAVLEDVN RKFSLRQYLK DVYIKKTMGP PVKAKALEVL AR
|
|---|
| |