Gene Tneu_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1628 
Symbol 
ID6165537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1440457 
End bp1441122 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content56% 
IMG OID641668789 
Producthypothetical protein 
Protein accessionYP_001794997 
Protein GI171186078 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTTA GATTTGGGGA TTTTGAGATA TCTTGGCTAG GACACGACAC CTTTAGGGTT 
GTGAGGGGCA GCGTTGTTCT GTATTTCGAC CCGTTTCAGG TGCAGGTGGG GGAGCCCAAG
GCTGATTACA TACTGGTTAC GCACGAGCAC TTCGACCACT GCGACCCGCC TTCGATTAAG
CGGTTGGCTA AGCCGTCTAC TGTTGTAGTT GCGCCGCGTA TAGCTAGGCG GTGTCTAGAG
GGCGTAGGCG TGGTGGAGGT GGGGCCTGGC GACGTGAAAG ACTTGGGCGT GTTTAAGGTG
GTCGCGTACC CCGCCTACAA CGTCAACAAG TTCCGCGACA AGTCGCGTGG CGTTGTGTTT
CACCCAAGGG AGGATGGGAG AGTGGCGTAT CTGGTGGAGT GGGGCGGCGT GAGGGTGTTC
CACGCGGGCG ACAGCGATTT TGTGCCGGAG TTTAGGGAGG TTAAAGCCGA CATAGTCCTC
GTGCCGGTGT CCGGCGTGTA TGTAATGACC GCGGAGGAGG CGGCCGAGTT TGTAAACGCT
GTGTCGCCGA GGGTGGCCAT CCCGATGCAC TACGGCTCCA TAGTTGGATC GAGGAGAGAC
GCCGAGAGGT TTAAATCTCT GGTTAGAGGT GGGGTAGAGG TAGTGATTTT AGATAGGGAA
ATATAG
 
Protein sequence
MPFRFGDFEI SWLGHDTFRV VRGSVVLYFD PFQVQVGEPK ADYILVTHEH FDHCDPPSIK 
RLAKPSTVVV APRIARRCLE GVGVVEVGPG DVKDLGVFKV VAYPAYNVNK FRDKSRGVVF
HPREDGRVAY LVEWGGVRVF HAGDSDFVPE FREVKADIVL VPVSGVYVMT AEEAAEFVNA
VSPRVAIPMH YGSIVGSRRD AERFKSLVRG GVEVVILDRE I