Gene Tneu_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1620 
Symbol 
ID6166282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1434945 
End bp1435472 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content55% 
IMG OID641668781 
Productheat shock protein Hsp20 
Protein accessionYP_001794989 
Protein GI171186070 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.192454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACACA TGTCCATATT CGACGAGTTC GAGAGGTTCA TGAGAAGGTG GCAGAAGTTC 
TTCGAGGAGG TGGAGCGCCA GATCGAGGAG GATTTCAGAA GGCTGTCGGC GGGCGGGCCC
GGGAGACCTC GCTACTACTA CTACGGCTTT GAAATAACCA TGGGCCCAGA CGGCCGGCCG
GTGGTGAGGG AGTTCGGCAA CGTGAGGAGG AAGCCGGATG TGGAGAGGAT CGAGGTAGTC
GACGAGATAG ATCCGCTCAC CGACGTCGTC GAGGAGAACG ACAAGATTAA GGTGGTTGTG
GACATGCCCG GCGTCGAGAA GGAGGATATA AAGCTCTACG TGAGCGAAGA CGGGAGAACG
TTGACGATAG ACGCCAGGGG CAAGGAGAGG AAGTACCACA AGGAAATTAG GCTACCGGCC
GCCGTGGATC CAAACAAGGC CAAGGCTACG TATAAAAACG GCGTGCTCTC CATAGAGCTG
GAGAAGGTAG AGAAGAAAAA AAGGGGATTT GAGATAAAGG TCGACTAG
 
Protein sequence
MLHMSIFDEF ERFMRRWQKF FEEVERQIEE DFRRLSAGGP GRPRYYYYGF EITMGPDGRP 
VVREFGNVRR KPDVERIEVV DEIDPLTDVV EENDKIKVVV DMPGVEKEDI KLYVSEDGRT
LTIDARGKER KYHKEIRLPA AVDPNKAKAT YKNGVLSIEL EKVEKKKRGF EIKVD