Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1619 |
Symbol | |
ID | 6165727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 1432691 |
End bp | 1434904 |
Gene Length | 2214 bp |
Protein Length | 737 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641668780 |
Product | AAA family ATPase, CDC48 subfamily protein |
Protein accession | YP_001794988 |
Protein GI | 171186069 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAGG TCATTCTCAA GGTGGCTGAG GCTAAGTCGC GCGACGTGGG TAGAAGCATC GTCAGAATCC CCGTCCGCAT AATGAAGAAG CTCGGCATAG AGCCAGGAGA CTACGTGGAG ATTTTCGGTA GGAAGTCCGC CTACGCCCAG GTGTGGCCGG CGTATCCGGA GGACGAGGAT AAGGACGTCA TTAGGATGGA CGGCATCATT AGGCAGAACG CGGGCGTCGG CATAGGAGAC ACCGTGAAGG TTAAGAAGGC CGTCTTGAAA TCGGCGCAGA GGGTTGTCTT GGCGCCCACG GAGCCCGTCA GAGTAGACCC GGAGTATCTC AAGAAGCAGG TGCTCCTCGG CAAACCGGTG GCCAGGGGAC AGGCCATAGA CGTGCCCTTC TACGGCGGCG CCATCAGATT CGTCGTGGTG CAGGTGCAGC CCGGCCCGGC GGCCTACGTC TCCATAGACA CAGAGGTGGC GGTGCGGGAG GAGCCTGTGA AGGAGGCCGA GCTGACGATC CCTAGGGTCA CCTGGGAGGA TATTGGTGAT TTGGAGGATG CTAAGCAGAA GATTCGTGAG CTTGTGGAGC TTCCTCTTAG GCATCCTGAG TTGTTTAAGC ATTTGGGTAT TGAGCCTCCG AAGGGTATCC TCTTGATTGG CCCTCCGGGC ACTGGCAAGA CCCTCCTCGC CAAGGCTGTG GCTAACGAGG CTAACGCCTA CTTCGTCGCC ATAAACGGCC CCGAGATCAT GTCTAAGTAC TACGGCGAGT CAGAGGCGCG GCTTAGGGAG ATCTTCGAAG AGGCGAAGAA GAACGCCCCC GCCATAATCT TCATAGACGA GATAGACGCC ATAGCCCCCA AACGCGAGGA GGTCACGGGG GAGGTGGAGA AGCGGGTGGT GGCCCAGCTA CTAACCCTAA TGGACGGGCT ACAAGAGAGA GGACAGGTAG TGGTAATAGG AGCAACCAAC CGCCCAGACG CAGTAGACCC AGCGTTGAGA AGACCAGGAA GATTCGACAG AGAGATCCAC ATACCCATGC CGGACAAGAG AGCCAGACGC GAGATTCTGG CAGTACACAC GCGCAACATG CCTCTTTGTA CAAAAGCCGA CGTGGAGAAC AAAATCTGTG CACAGGGGGA GGAGGTGGAT CTAGACAAAA TCGCTGAGAT GACCCACGGC TACACCGGCG CGGATCTCGC GGCGCTTGCA AAAGAGGCCG CCATGGCGGC GTTAAGAAAG GCCATGAACA GGGGGATGAT AAACGTTGAG CTAGACGTCA TTCCACAAGA GGTTTTGAAC AAACTGAAGG TCGGGATGTC CGACTTCCAA GAGGCTATGA AGTACGTCCA CCCCACCGTG TTGAGGGAGG TCATCATCGA GGTGCCCGAG GTGCGTTGGG ACGACATCGG GGGGTACGAA ACCATAAAAC AAGAGCTGAG GGAGATAGTG GAGTGGCCTA TGAAGTATAA ACACTACTTC GACGAGCTTG GCGTTGAGCC TCCTAAGGGC ATACTGCTCT TTGGGCCGCC CGGCGTTGGG AAGACGTTGT TTGCGAAGGC GGTGGCCACC GAGTCCGGCG CCAACTTCAT CGCAGTAAGG GGGCCCGAGC TCCTCTCCAA GTGGGTTGGC GAATCTGAGA AGGCCATACG CGAGGTCTTC AAGCGGGCGC GAATGGCGGC CCCCTGCGTT ATTTTCTTCG ACGAGATAGA CTCGATAGCG CCTGCAAGAG GGTCCCGGCT GGGCGACTCG GGGGTTACGG ACAGGATGGT AAACCAGCTA CTCGCGGAGA TGGACGGAAT CGGGACGCTC AAAAACGTGG TTGTCATGGC CGCCACAAAC AGGCCGGATA TACTGGACCC GGCGTTGCTG AGGCCCGGCC GCTTCGACAG AGTCATCTAC GTCCCTCCGC CCGACCTAAA GGCGAGAGTT GAGATACTCA AGGTACACAC CAAGAGGATA AAGCTGGGGG ACGACGTAAA CCTAGAGGAG CTGGCGAAGA GGACAGAGGG CTACACCGGC GCAGACCTCG CCGCAGTCGT GAGGGAGGCG GCAATGCTAG CGCTGAGAGA GACAATTAAG GAGAGGTCTG TAAAGGCTAA GCCGGTTTCT GCCAAGCACT TCGAGGAAGC TCTAAAGAGG ATACCGCCGT CGCTTACCCC AGAGGACATA AGGCGCTACG AGGAGATGGC CAAGAGGGTA AGACGGGCTA TAGCCGGGCT TTAG
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Protein sequence | MSEVILKVAE AKSRDVGRSI VRIPVRIMKK LGIEPGDYVE IFGRKSAYAQ VWPAYPEDED KDVIRMDGII RQNAGVGIGD TVKVKKAVLK SAQRVVLAPT EPVRVDPEYL KKQVLLGKPV ARGQAIDVPF YGGAIRFVVV QVQPGPAAYV SIDTEVAVRE EPVKEAELTI PRVTWEDIGD LEDAKQKIRE LVELPLRHPE LFKHLGIEPP KGILLIGPPG TGKTLLAKAV ANEANAYFVA INGPEIMSKY YGESEARLRE IFEEAKKNAP AIIFIDEIDA IAPKREEVTG EVEKRVVAQL LTLMDGLQER GQVVVIGATN RPDAVDPALR RPGRFDREIH IPMPDKRARR EILAVHTRNM PLCTKADVEN KICAQGEEVD LDKIAEMTHG YTGADLAALA KEAAMAALRK AMNRGMINVE LDVIPQEVLN KLKVGMSDFQ EAMKYVHPTV LREVIIEVPE VRWDDIGGYE TIKQELREIV EWPMKYKHYF DELGVEPPKG ILLFGPPGVG KTLFAKAVAT ESGANFIAVR GPELLSKWVG ESEKAIREVF KRARMAAPCV IFFDEIDSIA PARGSRLGDS GVTDRMVNQL LAEMDGIGTL KNVVVMAATN RPDILDPALL RPGRFDRVIY VPPPDLKARV EILKVHTKRI KLGDDVNLEE LAKRTEGYTG ADLAAVVREA AMLALRETIK ERSVKAKPVS AKHFEEALKR IPPSLTPEDI RRYEEMAKRV RRAIAGL
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