| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1594 |
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| Symbol | |
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| ID | 6164795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 1409083 |
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| End bp | 1410321 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641668755 |
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| Product | tRNA pseudouridine synthase D TruD |
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| Protein accession | YP_001794963 |
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| Protein GI | 171186044 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGAGG CCCCTCCCTT CGACAGAAGC CTAGGGATGC TATACTACGC CACAGACACC
TACCCATCGG GGGGCGTGAT AAAGGCGAAG CCGGAGGACT TCCTGGTCGA GGAGGTGTTG
TACGACGGGA CGGTGGTCGC GCTAGAGGGG GTATCTATAG AGCCGAGGGT GGGGGGCTGG
ACGTGGATCC ACGTGGTTAA GAGAAACGTA GACACAGTGA AGTTGGTGTT GCGCCTAGCC
AAGGCGCTGG GGCTGAGGAG TAGAGATATA TCCATCGGAG GCATAAAGGA CACAAGGGCT
GTCACATCCC AGATAGTCTC GGTCAGAGGG AACGTTGCAG ATCTTCCCAA GATTCCAAAT
GTCCAGTTCC TAGGCCTCTG GCCCATGGAC AAACCCATCG CGCCCTCTCT GATATATGGC
AACAGATTCA CCATCGTGTT GCGCAACGTC GAGAGGCGGG AGTGCGCGGA GGCCGCCTTA
GCGGCCTTGG GGAAGGCGGC GTTGCCCAAC TACTACGGGT ACCAACGCTT CGGCACAATA
CGTCCAGTCA GCCACCTCTT AGGCAAGGCG CTCCTGAGGA AAGACGCCGA GGGCTTCTTC
CACGTCATGT TCTGCAAGAT CTTCCCCTAC GAGTCCGAGG CGGCGAAGAA GGCGCGGGAG
CTGGCGTGTA GGGGGGAGTA CCAAAAGGCC CTGGAGGCCT TCCCAAGGGG GTTCGTTGAG
GAAAGGGCGC TCCTTAGGAG GCTCGTGCGG GGTTCCGACC TGTGGAACGC CGCTATGGCG
ATACCCCTAC AGATACTCAG GATATACATA GAGGCGGCGC AGTCCCACCT CTTCAACCTA
CTCCTCTCAA AACGCATGGA GCTCGGCCCA CTAGATCGGC CAGTTGAGGG GGACCTGGTG
GAGGTCAACG GACAGGTGAC GTACTACGTG GAAGACCTAG GCGGCGAGGT CGTGGTGCCT
GTGGTGGGGG CTGGGGTGAG GATGCCCCGC GGGAGGGTCC TCGAGGCTTT CGTGAAGGTG
TTGAAGGAGG AGGGCTTGGA GCCCTCCGCC TTTTTACAGA TGCCGAGGGG CCTCAGGGCC
TACGGTAGCT ACAGACGGGC TAGGCTACAG GCGAGGGACC TAGCCTACTC CCTAGGGGAC
GACTTAGTGC TACGGTTTGT GCTACCGCGG GGGGGCTACG CCACGGTTCT CCTTAGGGAG
GTGGTGAAGC CGACGGAGCC CTACAGACAC GGCTTCTAG
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| Protein sequence | MIEAPPFDRS LGMLYYATDT YPSGGVIKAK PEDFLVEEVL YDGTVVALEG VSIEPRVGGW
TWIHVVKRNV DTVKLVLRLA KALGLRSRDI SIGGIKDTRA VTSQIVSVRG NVADLPKIPN
VQFLGLWPMD KPIAPSLIYG NRFTIVLRNV ERRECAEAAL AALGKAALPN YYGYQRFGTI
RPVSHLLGKA LLRKDAEGFF HVMFCKIFPY ESEAAKKARE LACRGEYQKA LEAFPRGFVE
ERALLRRLVR GSDLWNAAMA IPLQILRIYI EAAQSHLFNL LLSKRMELGP LDRPVEGDLV
EVNGQVTYYV EDLGGEVVVP VVGAGVRMPR GRVLEAFVKV LKEEGLEPSA FLQMPRGLRA
YGSYRRARLQ ARDLAYSLGD DLVLRFVLPR GGYATVLLRE VVKPTEPYRH GF
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