Gene Tneu_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1570 
Symbol 
ID6166185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1389652 
End bp1390233 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content56% 
IMG OID641668728 
Productputative nucleotide binding protein 
Protein accessionYP_001794940 
Protein GI171186021 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1491] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGGCA GGAAGGAGGA GTACGCATAC GTAATAGACA TACTACCGCC GGAGGTCGCT 
CTCTACAAGC TACCGCCAAA GATGAGGCGG GACTTCCCCC ACGATGTAAC ATATGCGCAT
CTGGTGGGGG AGGACCACTT CGCCCTACTG GAGGTTACGC TGAAGAAGGG CGTCTCGGTC
GAGATCGGGG AGCGGCTTTA CGTGGGGCTA GGCACCAGGG AGAAGGTGGA CAAAATCGTG
AGACGCATCA GATATGAAGA TCTGCAACCG CAGGGGAGAG ACAACCTGAA GATTGTGGTG
AGGAAGATTG TGGAGCAACA GGAGTCCAGG TTTGTGAAGT GGATAAACGA GACCGGCCCC
GTGACGCTCA AGTTGCACAG CCTGGAGCTC CTAAGGGGGG TGGGTAAGAA GAAGGTGCAC
GAGGTGTTGG AGGAGAGGAA GAAGAAGCCC TTCTCGTCGT ACGAAGAGGT GAAACAGAGG
GTGGGTCTCG ACTTGGTCGA GTTGATAACA GACAGGATAC TCAGGGAGAT AGCGGGAGAA
GACCCGTACT ACCTCTTCGC CTCGCCGCCG CCTAGCCAGT AG
 
Protein sequence
MRGRKEEYAY VIDILPPEVA LYKLPPKMRR DFPHDVTYAH LVGEDHFALL EVTLKKGVSV 
EIGERLYVGL GTREKVDKIV RRIRYEDLQP QGRDNLKIVV RKIVEQQESR FVKWINETGP
VTLKLHSLEL LRGVGKKKVH EVLEERKKKP FSSYEEVKQR VGLDLVELIT DRILREIAGE
DPYYLFASPP PSQ