Gene Tneu_1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1565 
Symbol 
ID6165071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1387516 
End bp1387911 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content54% 
IMG OID641668723 
Product30S ribosomal protein S8e 
Protein accessionYP_001794935 
Protein GI171186016 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2007] Ribosomal protein S8E 
TIGRFAM ID[TIGR00307] ribosomal protein S8.e 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCTAG GCGCCTTTTA CAAGGGTGGG GATTTAAAGA AGCCAAGCGG CGGGAAGAAG 
AGGAGAGTAA GGAGGACGAA AAAGAAGGCA TTGGGAGGTG GACCTCCCCA GATTCCGAAA
CTAGGCGAGA ACGACGTTAG GGTCGTGGAG AGGGTGAGGG GAGGCAACAT AAAGGTGCGG
ATGAGGGAGG CAAGGTTCGC AAATGTATAT GTGCCGAAGG AGAAACGATA TGTGAAAGCT
AGAATCGTCT CCATAGTATC TACCCCGGCC AATCCCGACT ACGCGAGGCG TAACTTCATA
GTAAAGGGCG CGGTTATACA GACCGAGGTC GGCAAGGCGG TGGTTACGTC GAGGCCGGGG
CAAGACGGCG TTATCAACGC GGTACTTATA GAATGA
 
Protein sequence
MKLGAFYKGG DLKKPSGGKK RRVRRTKKKA LGGGPPQIPK LGENDVRVVE RVRGGNIKVR 
MREARFANVY VPKEKRYVKA RIVSIVSTPA NPDYARRNFI VKGAVIQTEV GKAVVTSRPG
QDGVINAVLI E